RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 HSDL1Q3SXM5 330 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 GDF6Q6KF10 455 aaPredicted RBP20.75■□□□□ 0.91
PTPRU-207ENST00000492954 HEATR3Q7Z4Q2 680 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 HERVK_113Q902F9 699 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 VWCEQ96DN2 955 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 INPP4AQ96PE3 977 aaPredicted RBP20.75■□□□□ 0.91
PTPRU-207ENST00000492954 TTYH1Q9H313 450 aaPredicted RBP20.75■□□□□ 0.91
PTPRU-207ENST00000492954 SEMA6BQ9H3T3 888 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 BCAS3Q9H6U6 928 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 RBM28Q9NW13 759 aaKnown RBP20.75■□□□□ 0.91
PTPRU-207ENST00000492954 NOD1Q9Y239 953 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 SNX14Q9Y5W7 946 aa20.75■□□□□ 0.91
PTPRU-207ENST00000492954 KLF18A0A0U1RQI7 1052 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 STAM2O75886 525 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 SEMA3FQ13275 785 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 MFSD10Q14728 455 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 UBE2SQ16763 222 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 PCNX4Q63HM2 1172 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 OTOP2Q7RTS6 562 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 SESTD1Q86VW0 696 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 JAKMIP1Q96N16 626 aaKnown RBP20.74■□□□□ 0.91
PTPRU-207ENST00000492954 CTAGE1Q96RT6 745 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 ALG1Q9BT22 464 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 MLXIPQ9HAP2 919 aa20.74■□□□□ 0.91
PTPRU-207ENST00000492954 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
PTPRU-207ENST00000492954 GOLGA8AA7E2F4 631 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 GOLGA8BA8MQT2 603 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 GRXCR1A8MXD5 290 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 PPFIA4O75335 1185 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 DNAJB2P25686 324 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 ICAM3P32942 547 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 FUT2Q10981 343 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 KIAA0753Q2KHM9 967 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 RPUSD2Q8IZ73 545 aaKnown RBP20.73■□□□□ 0.91
PTPRU-207ENST00000492954 HDAC6Q9UBN7 1215 aa20.73■□□□□ 0.91
PTPRU-207ENST00000492954 NAP1L2Q9ULW6 460 aaPredicted RBP20.73■□□□□ 0.91
PTPRU-207ENST00000492954 SPATA31C2B4DYI2 1134 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 HAS3O00219 553 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 PITPNM1O00562 1244 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 FIBPO43427 364 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 CDC27P30260 824 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 FGD1P98174 961 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 WWC2Q6AWC2 1192 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 DEFB128Q7Z7B8 93 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 C7orf31Q8N865 590 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 MTIF3Q9H2K0 278 aaKnown RBP20.72■□□□□ 0.91
PTPRU-207ENST00000492954 FAM217BQ9NTX9 383 aaPredicted RBP20.72■□□□□ 0.91
PTPRU-207ENST00000492954 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
PTPRU-207ENST00000492954 REC8O95072 547 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 PBX2P40425 430 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 APOBRQ0VD83 1088 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 BFSP2Q13515 415 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 XRRA1Q6P2D8 792 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 Q6ZUG5 572 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 RETREG2Q8NC44 543 aa20.71■□□□□ 0.91
PTPRU-207ENST00000492954 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
PTPRU-207ENST00000492954 CDX2Q99626 313 aaPredicted RBP20.71■□□□□ 0.91
PTPRU-207ENST00000492954 V9GY48 417 aaPredicted RBP20.71■□□□□ 0.91
PTPRU-207ENST00000492954 TMEM265A0A087WTH1 108 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 PFKMP08237 780 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 IQCF3P0C7M6 154 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 RCAN1P53805 252 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 NEDD9Q14511 834 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 TYW1BQ6NUM6 668 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 METTL7BQ6UX53 244 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 CYFIP1Q7L576 1253 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 TIFAQ96CG3 184 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 C16orf70Q9BSU1 422 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 PBX4Q9BYU1 374 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 TELO2Q9Y4R8 837 aa20.7■□□□□ 0.9
PTPRU-207ENST00000492954 MYH7BA7E2Y1 1941 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 SPDYE3A6NKU9 549 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 NOP56O00567 594 aaKnown RBP20.69■□□□□ 0.9
PTPRU-207ENST00000492954 LGALS2P05162 132 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
PTPRU-207ENST00000492954 NAPAP54920 295 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 CCDC155Q8N6L0 562 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 CAGE1Q8TC20 777 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 BRF1Q92994 677 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
PTPRU-207ENST00000492954 EYSQ5T1H1 3165 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 ZBBXA8MT70 800 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 ITGB5P18084 799 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 RPS6KB1P23443 525 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 RFC2P35250 354 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 ADD1P35611 737 aaKnown RBP20.68■□□□□ 0.9
PTPRU-207ENST00000492954 ZNF200P98182 395 aaPredicted RBP20.68■□□□□ 0.9
PTPRU-207ENST00000492954 HIC1Q14526 733 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 NLRX1Q86UT6 975 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 MYLIPQ8WY64 445 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 GPR20Q99678 358 aa20.68■□□□□ 0.9
PTPRU-207ENST00000492954 STXBP3O00186 592 aa20.67■□□□□ 0.9
PTPRU-207ENST00000492954 SP4Q02446 784 aa20.67■□□□□ 0.9
PTPRU-207ENST00000492954 PPP1R18Q6NYC8 613 aa20.67■□□□□ 0.9
PTPRU-207ENST00000492954 AFAP1L1Q8TED9 768 aa20.67■□□□□ 0.9
PTPRU-207ENST00000492954 GPRASP2Q96D09 838 aa20.67■□□□□ 0.9
PTPRU-207ENST00000492954 SENP7Q9BQF6 1050 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms