RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 PCDHA12Q9UN75 941 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 PTPN23Q9H3S7 1636 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 KANSL1LA0AUZ9 987 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 VWA3AA6NCI4 1184 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 NDUFB5O43674 189 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MSCO60682 206 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 IFNAR2P48551 515 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 INHBEP58166 350 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 ELOAQ14241 798 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 DCAF4L1Q3SXM0 396 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 JADE1Q6IE81 842 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 BRF1Q92994 677 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 SAE1Q9UBE0 346 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.85□□□□□ -1.47
FN1-224ENST00000492816 PALLDQ8WX93 1383 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 RALGAPBQ86X10 1494 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 EIF2AK4Q9P2K8 1649 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 C19orf81C9J6K1 198 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 HOXC6P09630 235 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 RALBP11234 206 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 ADCY1Q08828 1119 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 DGKZQ13574 1117 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MFSD4BQ5TF39 518 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 LRRC47Q8N1G4 583 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 KIF18AQ8NI77 898 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MIPOL1Q8TD10 442 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 TRIM11Q96F44 468 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MCCC1Q96RQ3 725 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 HMX1Q9NP08 348 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 DDX56Q9NY93 547 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 SERPINB13Q9UIV8 391 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 SPTLC2O15270 562 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 GCLCP48506 637 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 BYSLQ13895 437 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 OSBP2Q969R2 916 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 SEC62Q99442 399 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 SLC25A27O95847 323 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 GJB2P29033 226 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 CTCFP49711 727 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 TMEM179Q6ZVK1 233 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 UBLCP1Q8WVY7 318 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 STARD7Q9NQZ5 370 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MAGED2Q9UNF1 606 aaPredicted RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 SYCP2Q9BX26 1530 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 LDHAP00338 332 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 OR52Z1P0C646 297 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 DLATP10515 647 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 TFAMQ00059 246 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 PTPN14Q15678 1187 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 THEMIS2Q5TEJ8 643 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 ZSCAN1Q8NBB4 408 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 CDV3Q9UKY7 258 aaKnown RBP5.85□□□□□ -1.47
FN1-224ENST00000492816 PCDHB4Q9Y5E5 795 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 UGGT1Q9NYU2 1555 aa5.85□□□□□ -1.47
FN1-224ENST00000492816 MCM4P33991 863 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 TUBB4BP68371 445 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 KAZNQ674X7 775 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 CENPSQ8N2Z9 138 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 RPGRIP1Q96KN7 1286 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 SPATA33Q96N06 139 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 C1QTNF7Q9BXJ2 289 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MROH7Q68CQ1 1323 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 SYNGAP1Q96PV0 1343 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 ARHGAP10A1A4S6 786 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 CCDC151A5D8V7 595 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 CHEK2O96017 543 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 NT5C2P49902 561 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MICALL2Q8IY33 904 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 RABEP2Q9H5N1 569 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 NEUROD4Q9HD90 331 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 C6orf203Q9P0P8 240 aaPredicted RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 CTTNBP2NLQ9P2B4 639 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MRPS17Q9Y2R5 130 aaKnown RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 ORC6Q9Y5N6 252 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MEIS1O00470 390 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 KRT15P19012 456 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MRE11P49959 708 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 TGFB2P61812 414 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 AP1B1Q10567 949 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 ALCAMQ13740 583 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 ARHGEF7Q14155 803 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 MXD4Q14582 209 aaPredicted RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 KLC3Q6P597 504 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 TMED8Q6PL24 325 aaPredicted RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 SPICE1Q8N0Z3 855 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 RIN2Q8WYP3 895 aaPredicted RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 SPATA17Q96L03 361 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 ACAD9Q9H845 621 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 SLC38A7Q9NVC3 462 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 ZSCAN32Q9NX65 697 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 SFMBT1Q9UHJ3 866 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 BZW2Q9Y6E2 419 aaKnown RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 SUPT3HB4E1H0 165 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
FN1-224ENST00000492816 RNASE9P60153 205 aaKnown RBP5.84□□□□□ -1.47
FN1-224ENST00000492816 PTK2Q05397 1052 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms