RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 BFSP2Q13515 415 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 NEDD9Q14511 834 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 ZNF365Q70YC5 407 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 PPP4R2Q9NY27 417 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 STXBP5LQ9Y2K9 1186 aa27.22■■□□□ 1.95
CTDSP1-211ENST00000492545 UMODL1Q5DID0 1318 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 KLF18A0A0U1RQI7 1052 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 F2P00734 622 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 CYP2C9P11712 490 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 UBA1P22314 1058 aaKnown RBP27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 CCL23P55773 120 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 SP2Q02086 613 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 BLOC1S2Q6QNY1 142 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 RETREG2Q8NC44 543 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 HERVK_113Q902F9 699 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 JAKMIP1Q96N16 626 aaKnown RBP27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 WNT8AQ9H1J5 351 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 SNX14Q9Y5W7 946 aa27.21■■□□□ 1.95
CTDSP1-211ENST00000492545 hCG_1984214I3L0E3 225 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 ACRP10323 421 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 RFC2P35250 354 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 HEATR3Q7Z4Q2 680 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 NLRX1Q86UT6 975 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 CCDC155Q8N6L0 562 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 ZNF713Q8N859 430 aaPredicted RBP27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 C7orf31Q8N865 590 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 SENP7Q9BQF6 1050 aa27.2■■□□□ 1.94
CTDSP1-211ENST00000492545 GOLGA8AA7E2F4 631 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 GOLGA8BA8MQT2 603 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 HAS3O00219 553 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 PSEN2P49810 448 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 CHMP4BP1P59074 171 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 FUT2Q10981 343 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 PTGISQ16647 500 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 HSDL1Q3SXM5 330 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 PPP1R18Q6NYC8 613 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 METTL7BQ6UX53 244 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 GIMAP8Q8ND71 665 aaPredicted RBP27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 CDHR1Q96JP9 859 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 GLT8D2Q9H1C3 349 aa27.19■■□□□ 1.94
CTDSP1-211ENST00000492545 CNTNAP5Q8WYK1 1306 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 hCG_1642624A0A1W2PR95 340 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 SPDYE3A6NKU9 549 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 MFSD10Q14728 455 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 CAGE1Q8TC20 777 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 SEMA6BQ9H3T3 888 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 EHMT1Q9H9B1 1298 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 GTF2IRD1Q9UHL9 959 aa27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 V9GY48 417 aaPredicted RBP27.18■■□□□ 1.94
CTDSP1-211ENST00000492545 NOP56O00567 594 aaKnown RBP27.17■■□□□ 1.94
CTDSP1-211ENST00000492545 KIAA0753Q2KHM9 967 aa27.17■■□□□ 1.94
CTDSP1-211ENST00000492545 Q6ZUG5 572 aa27.17■■□□□ 1.94
CTDSP1-211ENST00000492545 ZFP91Q96JP5 570 aaPredicted RBP27.17■■□□□ 1.94
CTDSP1-211ENST00000492545 MAFGO15525 162 aa27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 RPS6KB1P23443 525 aa27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 METAP2P50579 478 aaKnown RBP eCLIP27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 GDF6Q6KF10 455 aaPredicted RBP27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 GPKOWQ92917 476 aaPredicted RBP eCLIP27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 GPRASP2Q96D09 838 aa27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 USP26Q9BXU7 913 aa27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 AGXT2Q9BYV1 514 aa27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 FAM217BQ9NTX9 383 aaPredicted RBP27.16■■□□□ 1.94
CTDSP1-211ENST00000492545 PARNO95453 639 aaKnown RBP27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 FOSP01100 380 aaPredicted RBP27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 IQCF3P0C7M6 154 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 ZNF286BP0CG31 522 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 NAPAP54920 295 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 WWC2Q6AWC2 1192 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 BRF1Q92994 677 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 SCLYQ96I15 445 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 C16orf70Q9BSU1 422 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 RIC8AQ9NPQ8 531 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 HDAC6Q9UBN7 1215 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 NAP1L2Q9ULW6 460 aaPredicted RBP27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 PCDHA6Q9UN73 950 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 PCDHA8Q9Y5H6 950 aa27.15■■□□□ 1.94
CTDSP1-211ENST00000492545 SEMA3FQ13275 785 aa27.14■■□□□ 1.94
CTDSP1-211ENST00000492545 AFAP1L1Q8TED9 768 aa27.14■■□□□ 1.94
CTDSP1-211ENST00000492545 ALG1Q9BT22 464 aa27.14■■□□□ 1.94
CTDSP1-211ENST00000492545 BARHL2Q9NY43 387 aa27.14■■□□□ 1.94
CTDSP1-211ENST00000492545 COL6A3P12111 3177 aa27.14■■□□□ 1.93
CTDSP1-211ENST00000492545 H3BRB1 525 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 ACTN1P12814 892 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 CPA1P15085 419 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 DNAJB2P25686 324 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 CDC27P30260 824 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 RBL2Q08999 1139 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 CYFIP1Q7L576 1253 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 OTOP2Q7RTS6 562 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 PPP1R13LQ8WUF5 828 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 GUCD1Q96NT3 240 aa27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 TUT1Q9H6E5 874 aaKnown RBP27.13■■□□□ 1.93
CTDSP1-211ENST00000492545 SORBS3O60504 671 aa27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 ADD1P35611 737 aaKnown RBP27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 APOBRQ0VD83 1088 aa27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 PTK7Q13308 1070 aa27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 UBE2SQ16763 222 aa27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 FAM161BQ96MY7 647 aa27.12■■□□□ 1.93
CTDSP1-211ENST00000492545 CTAGE1Q96RT6 745 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms