RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 GTF2IRD1Q9UHL9 959 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 BAZ2BQ9UIF8 2168 aaKnown RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 TRANK1O15050 2925 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 GBF1Q92538 1859 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 CCDC69A6NI79 296 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 OPLAHO14841 1288 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 F2P00734 622 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 SELPP16109 830 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 LIFRP42702 1097 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 KCNJ6P48051 423 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 PSEN2P49810 448 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 PTK7Q13308 1070 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 NEDD9Q14511 834 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 MFSD10Q14728 455 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 CELF3Q5SZQ8 465 aaKnown RBP10.11□□□□□ -0.79
NUP50-217ENST00000491860 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 CHST3Q7LGC8 479 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 MB21D2Q8IYB1 491 aaPredicted RBP10.11□□□□□ -0.79
NUP50-217ENST00000491860 ZNF654Q8IZM8 581 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 IL27Q8NEV9 243 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 IGDCC4Q8TDY8 1250 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 CDHR1Q96JP9 859 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 PIGSQ96S52 555 aa10.11□□□□□ -0.79
NUP50-217ENST00000491860 RBM8AQ9Y5S9 174 aaKnown RBP10.11□□□□□ -0.79
NUP50-217ENST00000491860 TRIP12Q14669 1992 aaPredicted RBP10.11□□□□□ -0.79
NUP50-217ENST00000491860 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 EMSYQ7Z589 1322 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 HAS3O00219 553 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 PIK3CDO00329 1044 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
NUP50-217ENST00000491860 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
NUP50-217ENST00000491860 GNAT1P11488 350 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 ICAM3P32942 547 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 CHMP4BP1P59074 171 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 KIAA0753Q2KHM9 967 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 LRRC8DQ7L1W4 858 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 SMARCC2Q8TAQ2 1214 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 PPM1EQ8WY54 764 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 KAT2BQ92831 832 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 SPATA33Q96N06 139 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 USP26Q9BXU7 913 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 NKX2-4Q9H2Z4 354 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 EHMT1Q9H9B1 1298 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 MLXIPQ9HAP2 919 aa10.1□□□□□ -0.79
NUP50-217ENST00000491860 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 FIBPO43427 364 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 PRC1O43663 620 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 CYTH3O43739 400 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 CAND2O75155 1236 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 GGPS1O95749 300 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 BMP1P13497 986 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 HOXA13P31271 388 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 AAK1Q2M2I8 961 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 BMP2KLQ5H9B9 411 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 GDF6Q6KF10 455 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 CNKSR3Q6P9H4 555 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 NLRX1Q86UT6 975 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 FCHSD1Q86WN1 690 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 SENP7Q9BQF6 1050 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 ESYT1Q9BSJ8 1104 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 LY9Q9HBG7 655 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 HDAC6Q9UBN7 1215 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
NUP50-217ENST00000491860 SLC12A7Q9Y666 1083 aa10.09□□□□□ -0.79
NUP50-217ENST00000491860 KAT6AQ92794 2004 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 SH2B2O14492 632 aaPredicted RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 MAFGO15525 162 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 RGS20O76081 388 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 CXCL10P02778 98 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 RPLP2P05387 115 aaKnown RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 CKBP12277 381 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 POU3F3P20264 500 aaPredicted RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 UBA1P22314 1058 aaKnown RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 ANTXR2P58335 489 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 KRT32Q14532 448 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 PCNX4Q63HM2 1172 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 METTL7BQ6UX53 244 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
NUP50-217ENST00000491860 YBX2Q9Y2T7 364 aaKnown RBP10.08□□□□□ -0.8
NUP50-217ENST00000491860 C17orf102A2RUQ5 167 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 H3BRB1 525 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 hCG_1984214I3L0E3 225 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 SLC27A2O14975 620 aa10.07□□□□□ -0.8
NUP50-217ENST00000491860 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
NUP50-217ENST00000491860 ZNF286BP0CG31 522 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms