RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF713Q8N859 430 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 AFAP1L1Q8TED9 768 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 GAS2L1Q99501 681 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 CDX2Q99626 313 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 USP26Q9BXU7 913 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 ZNF215Q9UL58 517 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 LTBP2Q14767 1821 aa19.04■□□□□ 0.64
PDLIM2-217ENST00000491330 EIF5BO60841 1220 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 RTN1Q16799 776 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 KIAA0753Q2KHM9 967 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 PCNX4Q63HM2 1172 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 C16orf59Q7L2K0 433 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 HEATR3Q7Z4Q2 680 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 DEFB128Q7Z7B8 93 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 SCLYQ96I15 445 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 LRRC2Q9BYS8 371 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 ZNF576Q9H609 170 aa19.03■□□□□ 0.64
PDLIM2-217ENST00000491330 PLEKHA8P1O95397 391 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 RXRAP19793 462 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 ICAM3P32942 547 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 KCNJ6P48051 423 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 RCAN1P53805 252 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 TMTC3Q6ZXV5 915 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 TNPO1Q92973 898 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 INPP4AQ96PE3 977 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 RTEL1Q9NZ71 1219 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 GTF2IRD1Q9UHL9 959 aa19.02■□□□□ 0.64
PDLIM2-217ENST00000491330 UMODL1Q5DID0 1318 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 MAFGO15525 162 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 F2P00734 622 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 FOSP01100 380 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 IQCF3P0C7M6 154 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 SELPP16109 830 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 ATP2A2P16615 1042 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 UBA1P22314 1058 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 AKAP17AQ02040 695 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 PTK7Q13308 1070 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 RASIP1Q5U651 963 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 APOA5Q6Q788 366 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 USP17L6PQ6QN14 398 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 BLOC1S2Q6QNY1 142 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 METTL7BQ6UX53 244 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 GUCD1Q96NT3 240 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 HDAC6Q9UBN7 1215 aa19.01■□□□□ 0.63
PDLIM2-217ENST00000491330 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 GOLGA8BA8MQT2 603 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 SPATA31C2B4DYI2 1134 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 H3BRB1 525 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 EFCAB14O75071 495 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 BAIAP3O94812 1187 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 ZNF286BP0CG31 522 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 NAPAP54920 295 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 HSDL1Q3SXM5 330 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 MCTP2Q6DN12 878 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 PPP1R18Q6NYC8 613 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 CMTR1Q8N1G2 835 aaKnown RBP19■□□□□ 0.63
PDLIM2-217ENST00000491330 PHOSPHO2Q8TCD6 241 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 CCDC12Q8WUD4 166 aaPredicted RBP19■□□□□ 0.63
PDLIM2-217ENST00000491330 GPRASP2Q96D09 838 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 SLC9A7Q96T83 725 aa19■□□□□ 0.63
PDLIM2-217ENST00000491330 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
PDLIM2-217ENST00000491330 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 SORBS3O60504 671 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 RGS20O76081 388 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 EXOSC10Q01780 885 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 GDF6Q6KF10 455 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 LRRC8DQ7L1W4 858 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 CYFIP1Q7L576 1253 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 MAFAQ8NHW3 353 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 IL31RAQ8NI17 732 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 KAT2BQ92831 832 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 PBX4Q9BYU1 374 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 FRMPD4Q14CM0 1322 aa18.99■□□□□ 0.63
PDLIM2-217ENST00000491330 RANBP2P49792 3224 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 MEIS2O14770 477 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 HOXD8P13378 290 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 METAP2P50579 478 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 ADCY7P51828 1080 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 RAB11FIP4Q86YS3 637 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 MYLIPQ8WY64 445 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 JAKMIP1Q96N16 626 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 TTYH1Q9H313 450 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 PCDHA11Q9Y5I1 949 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 V9GY48 417 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 EMSYQ7Z589 1322 aa18.98■□□□□ 0.63
PDLIM2-217ENST00000491330 HAS3O00219 553 aa18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 MRPS9P82933 396 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 MTMR1Q13613 665 aa18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 ZFP91Q96JP5 570 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 ZBED2Q9BTP6 218 aa18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 CXXC1Q9P0U4 656 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 PCDHA6Q9UN73 950 aa18.97■□□□□ 0.63
PDLIM2-217ENST00000491330 PCDHA8Q9Y5H6 950 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms