RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DMGDHQ9UI17 866 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 TJP1Q07157 1748 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 MARCH6O60337 910 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 RPSAP08865 295 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 FNTAP49354 379 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 MECOMQ03112 1051 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 NARFQ9UHQ1 456 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 GOLGA8KD6RF30 607 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 FSBPO95073 299 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 IMPDH2P12268 514 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 LONP1P36776 959 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 DNM2P50570 870 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 ARID5AQ03989 594 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 LAMB3Q13751 1172 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 IRF2BP1Q8IU81 584 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 NLGN1Q8N2Q7 840 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 EHBP1Q8NDI1 1231 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 LMBR1Q8WVP7 490 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 CDK5RAP3Q96JB5 506 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 RPGRIP1Q96KN7 1286 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 RCCD1A6NED2 376 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 PSMD14O00487 310 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 PYGBP11216 843 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 FCER1AP12319 257 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TECP42680 631 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 NAPAP54920 295 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 NPY5RQ15761 445 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 PFKFB3Q16875 520 aaPredicted RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 CABP7Q86V35 215 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 RAD21O60216 631 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 PLCG1P19174 1290 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TXKP42681 527 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 RCAN1P53805 252 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 IFT88Q13099 833 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 THEMIS2Q5TEJ8 643 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 MFSD4BQ5TF39 518 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 CACNA2D4Q7Z3S7 1137 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 IFIH1Q9BYX4 1025 aaKnown RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
BRD9-209ENST00000490814 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
BRD9-209ENST00000490814 TARSL2A2RTX5 802 aaKnown RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 RTN3O95197 1032 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 MOCS3O95396 460 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 MICALCLQ6ZW33 695 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 BUB1O43683 1085 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 TACC1O75410 805 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 KRT14P02533 472 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 OATP04181 439 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 GUCY1A3Q02108 690 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 USP4Q13107 963 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 NNTQ13423 1086 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 CFAP58Q5T655 872 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 WDR59Q6PJI9 974 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 PCDHA4Q9UN74 947 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 FAM170AA1A519 330 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 LRRC10BA6NIK2 292 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 PAFAH1B1P43034 410 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 CD151P48509 253 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 STK4Q13043 487 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 SNCBQ16143 134 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 RRAGAQ7L523 313 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 SPATA21Q7Z572 469 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 TCP11Q8WWU5 503 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 TNFRSF25Q93038 417 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 FAM84BQ96KN1 310 aaPredicted RBP11.18□□□□□ -0.62
BRD9-209ENST00000490814 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 NLRC4Q9NPP4 1024 aa11.18□□□□□ -0.62
BRD9-209ENST00000490814 CAPN11Q9UMQ6 739 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms