RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ALKBH5Q6P6C2 394 aaKnown RBP14.04□□□□□ -0.16
SHOX2-205ENST00000490689 AMACRQ9UHK6 382 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 FBXL5Q9UKA1 691 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 SNX24Q9Y343 169 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 DAPK3O43293 454 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 FGGP02679 453 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
SHOX2-205ENST00000490689 CDKAL1Q5VV42 579 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 FMO2Q99518 471 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 CPSF2Q9P2I0 782 aaKnown RBP14.04□□□□□ -0.16
SHOX2-205ENST00000490689 TBK1Q9UHD2 729 aa14.04□□□□□ -0.16
SHOX2-205ENST00000490689 CLIC2O15247 247 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 SERPING1P05155 500 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 SRGNP10124 158 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 NBPF3Q9H094 633 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 RNF14Q9UBS8 474 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 GFPT2O94808 682 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 MMEP08473 750 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 GDAP1Q8TB36 358 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 PLCB1Q9NQ66 1216 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 RNF225M0QZC1 329 aaPredicted RBP14.03□□□□□ -0.16
SHOX2-205ENST00000490689 ALDH3A1P30838 453 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 ARPP21Q9UBL0 812 aaPredicted RBP14.03□□□□□ -0.16
SHOX2-205ENST00000490689 FRMD4BQ9Y2L6 1034 aa14.03□□□□□ -0.16
SHOX2-205ENST00000490689 PDE2AO00408 941 aaPredicted RBP14.02□□□□□ -0.16
SHOX2-205ENST00000490689 LRRN2O75325 713 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 SYF2O95926 243 aaKnown RBP14.02□□□□□ -0.16
SHOX2-205ENST00000490689 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.16
SHOX2-205ENST00000490689 LMNTD2Q8IXW0 634 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 MYCT1Q8N699 235 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 KIF20BQ96Q89 1820 aa14.02□□□□□ -0.16
SHOX2-205ENST00000490689 POTEJP0CG39 1038 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 STAG2Q8N3U4 1231 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 KCNV2Q8TDN2 545 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 PIGSQ96S52 555 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 TRIM6Q9C030 488 aaPredicted RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 DNM3Q9UQ16 869 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 MEIS1O00470 390 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 KRT15P19012 456 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 SARSP49591 514 aaKnown RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 ZNF211Q13398 564 aaPredicted RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 MESDQ14696 234 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 ALX1Q15699 326 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 PFKFB3Q16875 520 aaPredicted RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 GLE1Q53GS7 698 aaKnown RBP14.02□□□□□ -0.17
SHOX2-205ENST00000490689 SLC44A5Q8NCS7 719 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
SHOX2-205ENST00000490689 PPP2R2AP63151 447 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 LRRC14Q15048 493 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 CCDC38Q502W7 563 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 CCDC174Q6PII3 467 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 DDX12PQ92771 950 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
SHOX2-205ENST00000490689 CCDC160A6NGH7 325 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 EXOC3O60645 756 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 ELF1P32519 619 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 MDM2Q00987 491 aaPredicted RBP14.01□□□□□ -0.17
SHOX2-205ENST00000490689 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
SHOX2-205ENST00000490689 NUGGCQ68CJ6 796 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 ZNF365Q70YC5 407 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
SHOX2-205ENST00000490689 IKBKGQ9Y6K9 419 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 SNX1Q13596 522 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 USH1GQ495M9 461 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 CALUO43852 315 aaPredicted RBP14.01□□□□□ -0.17
SHOX2-205ENST00000490689 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
SHOX2-205ENST00000490689 GBP1P32455 592 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 MDM1Q8TC05 714 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 AK8Q96MA6 479 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 GEMIN8Q9NWZ8 242 aaKnown RBP14□□□□□ -0.17
SHOX2-205ENST00000490689 FRMPD1Q5SYB0 1578 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 RIMBP2O15034 1052 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 RAD51CO43502 376 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 SUN1O94901 812 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 ACSL3O95573 720 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 GNA14O95837 355 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 DIXDC1Q155Q3 683 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 PARP10Q53GL7 1025 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 RNF10Q8N5U6 811 aaKnown RBP14□□□□□ -0.17
SHOX2-205ENST00000490689 NEK9Q8TD19 979 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 CYFIP2Q96F07 1278 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 PSMD1Q99460 953 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 FAM114A2Q9NRY5 505 aa14□□□□□ -0.17
SHOX2-205ENST00000490689 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms