RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 LOXHD1Q8IVV2 1947 aa10.91□□□□□ -0.66
NOD1-208ENST00000489614 H7C1D1 291 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 CTNND1O60716 968 aaKnown RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 PPP6R2O75170 966 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 COQ9O75208 318 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 KIAA0754O94854 1291 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 NDUFB10O96000 172 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 CDC25CP30307 473 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 GHRHRQ02643 423 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 DIS3L2Q8IYB7 885 aaKnown RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 ADGRF4Q8IZF3 695 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 C4orf32Q8N8J7 132 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 IGSF22Q8N9C0 903 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 ENGASEQ8NFI3 743 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 ERLIN1O75477 346 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 GOLGA8HP0CJ92 632 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 CHMP4BP1P59074 171 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 RNF187Q5TA31 235 aaPredicted RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 NBPF12Q5TAG4 269 aaPredicted RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 CCDC181Q5TID7 509 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
NOD1-208ENST00000489614 C12orf42Q96LP6 360 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 PCDHA4Q9UN74 947 aa10.9□□□□□ -0.66
NOD1-208ENST00000489614 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.67
NOD1-208ENST00000489614 SLC39A14Q15043 492 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 TTBK2Q6IQ55 1244 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 ACER1Q8TDN7 264 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 CRYGNQ8WXF5 182 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 SAAL1Q96ER3 474 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.67
NOD1-208ENST00000489614 ANKZF1Q9H8Y5 726 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 TMEM165Q9HC07 324 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 GOPCQ9HD26 462 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 CFAP45Q9UL16 551 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 PCDHA6Q9UN73 950 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 PCDHA8Q9Y5H6 950 aa10.9□□□□□ -0.67
NOD1-208ENST00000489614 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 GLTPD2A6NH11 291 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 F5H6K3 240 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 KRT2P35908 639 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 ECE1P42892 770 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 VSNL1P62760 191 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 KLRC3Q07444 240 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 NR5A1Q13285 461 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 MTA1Q13330 715 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.89□□□□□ -0.67
NOD1-208ENST00000489614 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 CCDC12Q8WUD4 166 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 PNMA6FA0A0J9YX94 578 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 hCG_1642624A0A1W2PR95 340 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 ZNF202O95125 648 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 FAM163BP0C2L3 166 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 RANBP1P43487 201 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 IRAK1P51617 712 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 KARSQ15046 597 aaKnown RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 ANO1Q5XXA6 986 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 ZSCAN29Q8IWY8 852 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 CCDC150Q8NCX0 1101 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 PIGSQ96S52 555 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 ZCWPW1Q9H0M4 648 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 RANBP17Q9H2T7 1088 aaKnown RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 CPVLQ9H3G5 476 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 GGA3Q9NZ52 723 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.89□□□□□ -0.67
NOD1-208ENST00000489614 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
NOD1-208ENST00000489614 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 OPLAHO14841 1288 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 KIF4AO95239 1232 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 MYBL1P10243 752 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 CDR1P51861 262 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 GLIS2Q9BZE0 524 aaPredicted RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 TUBB4AP04350 444 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 ASNSP08243 561 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 EZRP15311 586 aaKnown RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 TRAPPC10P48553 1259 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 FNTAP49354 379 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 CEP112Q8N8E3 955 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 CRACR2AQ9BSW2 395 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 YIPF3Q9GZM5 350 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 GOLPH3LQ9H4A5 285 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms