RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LRRC37A2A6NM11 1700 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 MAFGO15525 162 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 SYN1P17600 705 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 SP2Q02086 613 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 ITGA7Q13683 1181 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 NEDD9Q14511 834 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 ME3Q16798 604 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 MYSM1Q5VVJ2 828 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 SLC43A3Q8NBI5 491 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 PPTC7Q8NI37 304 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 GPRASP2Q96D09 838 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 ANO3Q9BYT9 981 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 VPS54Q9P1Q0 977 aa19.85■□□□□ 0.77
MDC1-206ENST00000489540 PQBP1O60828 265 aaKnown RBP19.84■□□□□ 0.77
MDC1-206ENST00000489540 GGPS1O95749 300 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 UBA1P22314 1058 aaKnown RBP19.84■□□□□ 0.77
MDC1-206ENST00000489540 NLRP5P59047 1200 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 DGKDQ16760 1214 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 REXO1Q8N1G1 1221 aaKnown RBP19.84■□□□□ 0.77
MDC1-206ENST00000489540 IL27Q8NEV9 243 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 KIF2CQ99661 725 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 SENP7Q9BQF6 1050 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 MLXIPQ9HAP2 919 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 LIMCH1Q9UPQ0 1083 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 UBIAD1Q9Y5Z9 338 aa19.84■□□□□ 0.77
MDC1-206ENST00000489540 PPFIA4O75335 1185 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 MMP3P08254 477 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 CLTBP09497 229 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 ITGB5P18084 799 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 SREBF1P36956 1147 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 JAKMIP3Q5VZ66 844 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 GIMAP8Q8ND71 665 aaPredicted RBP19.83■□□□□ 0.76
MDC1-206ENST00000489540 SPATA33Q96N06 139 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 JADE2Q9NQC1 790 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 TMEM260Q9NX78 707 aa19.83■□□□□ 0.76
MDC1-206ENST00000489540 STK36Q9NRP7 1315 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 TLR3O15455 904 aaKnown RBP19.82■□□□□ 0.76
MDC1-206ENST00000489540 SEMA3FQ13275 785 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 GALNT17Q6IS24 598 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 NECAB1Q8N987 351 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 WASF1Q92558 559 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 GTF3C6Q969F1 213 aa19.82■□□□□ 0.76
MDC1-206ENST00000489540 GRIN2DO15399 1336 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 XBP1P17861 261 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 PSMC6P62333 389 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 FAAP100Q0VG06 881 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 MTMR1Q13613 665 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 RABEP1Q15276 862 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 METTL7BQ6UX53 244 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 CHRDL2Q6WN34 429 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 LBHD1Q9BQE6 289 aaPredicted RBP19.81■□□□□ 0.76
MDC1-206ENST00000489540 MXRA8Q9BRK3 442 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 PRDM5Q9NQX1 630 aaPredicted RBP19.81■□□□□ 0.76
MDC1-206ENST00000489540 PDLIM7Q9NR12 457 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 TMEM39AQ9NV64 488 aa19.81■□□□□ 0.76
MDC1-206ENST00000489540 CTDNEP1O95476 244 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 HOXD8P13378 290 aaPredicted RBP19.8■□□□□ 0.76
MDC1-206ENST00000489540 ZNF76P36508 570 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 ARHGAP4P98171 946 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 HSDL1Q3SXM5 330 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 CEP55Q53EZ4 464 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 CYFIP1Q7L576 1253 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 FAM126BQ8IXS8 530 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 ZSCAN31Q96LW9 406 aaPredicted RBP19.8■□□□□ 0.76
MDC1-206ENST00000489540 GDF15Q99988 308 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
MDC1-206ENST00000489540 COLQQ9Y215 455 aaPredicted RBP19.8■□□□□ 0.76
MDC1-206ENST00000489540 TRIM43BA6NCK2 446 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 KIAA0355O15063 1070 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 LARGE1O95461 756 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 CYP3A4P08684 503 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 NBPF20Q3BBV1 942 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 NFRKBQ6P4R8 1299 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 TRIM43Q96BQ3 446 aaPredicted RBP19.79■□□□□ 0.76
MDC1-206ENST00000489540 KATNAL1Q9BW62 490 aa19.79■□□□□ 0.76
MDC1-206ENST00000489540 ORC3Q9UBD5 711 aaPredicted RBP19.79■□□□□ 0.76
MDC1-206ENST00000489540 MEIS1O00470 390 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 NOP56O00567 594 aaKnown RBP19.78■□□□□ 0.76
MDC1-206ENST00000489540 ADAMTS3O15072 1205 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 SORBS3O60504 671 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 CD4P01730 458 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 SUPT20HL2P0C7V6 817 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 BMP8BP34820 402 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 MAGEA10P43363 369 aaPredicted RBP19.78■□□□□ 0.76
MDC1-206ENST00000489540 PTPN11Q06124 597 aaPredicted RBP19.78■□□□□ 0.76
MDC1-206ENST00000489540 NIPA1Q7RTP0 329 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 SH3RF1Q7Z6J0 888 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 CRYGNQ8WXF5 182 aa19.78■□□□□ 0.76
MDC1-206ENST00000489540 ATP9AO75110 1047 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 KCNA2P16389 499 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 BLIDQ8IZY5 108 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 CYP2W1Q8TAV3 490 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 RASGRP4Q8TDF6 673 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 KAT2BQ92831 832 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 AIFM3Q96NN9 605 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 PRO3102Q9H379 93 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 BCAS3Q9H6U6 928 aa19.77■□□□□ 0.76
MDC1-206ENST00000489540 SH2B1Q9NRF2 756 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms