RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 SMOC2Q9H3U7 446 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 PLAGL2Q9UPG8 496 aa17.93■□□□□ 0.46
UFD1-209ENST00000489406 LOC102724159A0A0B4J2E5 919 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 CLCN5P51795 746 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 MTMR3Q13615 1198 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 PWP2Q15269 919 aaKnown RBP17.92■□□□□ 0.46
UFD1-209ENST00000489406 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 RSPO4Q2I0M5 234 aaPredicted RBP17.92■□□□□ 0.46
UFD1-209ENST00000489406 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 OSBPL7Q9BZF2 842 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 FRYLO94915 3013 aa17.92■□□□□ 0.46
UFD1-209ENST00000489406 PTPDC1A2A3K4 754 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 GOLIM4O00461 696 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 BCAR3O75815 825 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 CALML3P27482 149 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 RBM10P98175 930 aaKnown RBP17.91■□□□□ 0.46
UFD1-209ENST00000489406 CLP1Q92989 425 aaKnown RBP17.91■□□□□ 0.46
UFD1-209ENST00000489406 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 SORCS3Q9UPU3 1222 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
UFD1-209ENST00000489406 NFIBO00712 420 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 HIC1Q14526 733 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 MFSD10Q14728 455 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 KIAA0753Q2KHM9 967 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 DNAJC2Q99543 621 aaKnown RBP17.9■□□□□ 0.46
UFD1-209ENST00000489406 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 ADGRA3Q8IWK6 1321 aa17.9■□□□□ 0.46
UFD1-209ENST00000489406 TTLL1O95922 423 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 GH1P01241 217 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 ARP10275 920 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 ARHGAP1Q07960 439 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 SLC30A10Q6XR72 485 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 KCTD1Q719H9 257 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 DHX37Q8IY37 1157 aaKnown RBP17.89■□□□□ 0.45
UFD1-209ENST00000489406 DCLK2Q8N568 766 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 FLCNQ8NFG4 579 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 SPPL3Q8TCT6 385 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 SSH3Q8TE77 659 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 PLVAPQ9BX97 442 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 SEMA4AQ9H3S1 761 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 PRR12Q9ULL5 1215 aa17.89■□□□□ 0.45
UFD1-209ENST00000489406 PI15O43692 258 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 ITGB1P05556 798 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 MCCP23508 829 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 SLC1A4P43007 532 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 BTG3Q14201 252 aaPredicted RBP17.88■□□□□ 0.45
UFD1-209ENST00000489406 DGKDQ16760 1214 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 LY6KQ17RY6 165 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 CCDC62Q6P9F0 684 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 AACSQ86V21 672 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 CYP2W1Q8TAV3 490 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 MPHOSPH6Q99547 160 aaKnown RBP17.88■□□□□ 0.45
UFD1-209ENST00000489406 HAUS7Q99871 368 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 TLE6Q9H808 572 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 ARPP21Q9UBL0 812 aaPredicted RBP17.88■□□□□ 0.45
UFD1-209ENST00000489406 SYNPO2Q9UMS6 1093 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 R4GN57 208 aa17.88■□□□□ 0.45
UFD1-209ENST00000489406 PER2O15055 1255 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 CHGBP05060 677 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 ICAM1P05362 532 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 ZNF286BP0CG31 522 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 EDNRBP24530 442 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 ADD2P35612 726 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
UFD1-209ENST00000489406 SERINC5Q86VE9 423 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 CCDC105Q8IYK2 499 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 GMCL1Q96IK5 515 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 KATNAL1Q9BW62 490 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 APOL5Q9BWW9 433 aa17.87■□□□□ 0.45
UFD1-209ENST00000489406 NOP58Q9Y2X3 529 aaKnown RBP17.87■□□□□ 0.45
UFD1-209ENST00000489406 MYO10Q9HD67 2058 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 HAS3O00219 553 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 PRDM1O75626 825 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 CTSHP09668 335 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 ATP8B2P98198 1209 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 ACAP1Q15027 740 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 CWF19L1Q69YN2 538 aaKnown RBP17.86■□□□□ 0.45
UFD1-209ENST00000489406 ZNF444Q8N0Y2 327 aaPredicted RBP17.86■□□□□ 0.45
UFD1-209ENST00000489406 VN1R2Q8NFZ6 395 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 POF1BQ8WVV4 589 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 P2RX5Q93086 422 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
UFD1-209ENST00000489406 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
UFD1-209ENST00000489406 ANKRD11Q6UB99 2663 aaPredicted RBP17.85■□□□□ 0.45
UFD1-209ENST00000489406 PLA2G6O60733 806 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 OTOGLQ3ZCN5 2332 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 RNF207Q6ZRF8 634 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 SEPT14Q6ZU15 432 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 DTWD2Q8NBA8 298 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 KLHL23Q8NBE8 558 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 ATP8B4Q8TF62 1192 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 RUBCNQ92622 972 aa17.85■□□□□ 0.45
UFD1-209ENST00000489406 F2P00734 622 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms