RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 REXO1Q8N1G1 1221 aaKnown RBP9.52□□□□□ -0.89
VTI1A-207ENST00000489357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.52□□□□□ -0.89
VTI1A-207ENST00000489357 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.89
VTI1A-207ENST00000489357 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 KANSL2Q9H9L4 492 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 FANCLQ9NW38 375 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 NYAP2Q9P242 653 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 PI4KBQ9UBF8 816 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 NFE2L3Q9Y4A8 694 aa9.52□□□□□ -0.89
VTI1A-207ENST00000489357 UQCRHLA0A096LP55 91 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 SMCO2A6NFE2 343 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 LRRC10BA6NIK2 292 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PPP1R12BO60237 982 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-207ENST00000489357 AOC2O75106 756 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 UQCRHP07919 91 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 OR52Z1P0C646 297 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 NF2P35240 595 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 UBA7P41226 1012 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 STAT6P42226 847 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ECE1P42892 770 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 HUNKP57058 714 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 AMPD3Q01432 767 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ZNF543Q08ER8 600 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 TCP10Q12799 353 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 STIM1Q13586 685 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PDIA5Q14554 519 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 FILIP1LQ4L180 1135 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 SPECC1Q5M775 1068 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
VTI1A-207ENST00000489357 CDKAL1Q5VV42 579 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 SPECC1LQ69YQ0 1117 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PPP4R3AQ6IN85 833 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 RGMBQ6NW40 437 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 USP49Q70CQ1 688 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ARMC9Q7Z3E5 817 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 TMC6Q7Z403 805 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PDILTQ8N807 584 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ANKRD20A12PQ8NF67 263 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 NOC3LQ8WTT2 800 aaKnown RBP9.51□□□□□ -0.89
VTI1A-207ENST00000489357 DCAF4Q8WV16 495 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
VTI1A-207ENST00000489357 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 NAA15Q9BXJ9 866 aaKnown RBP9.51□□□□□ -0.89
VTI1A-207ENST00000489357 TMX1Q9H3N1 280 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 KBTBD4Q9NVX7 518 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 STK17AQ9UEE5 414 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 FZD1Q9UP38 647 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 ITIH6Q6UXX5 1313 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
VTI1A-207ENST00000489357 PTPRFP10586 1907 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 A0A087X0B3 334 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 A0A1B0GTH6 734 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 FOXN1O15353 648 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 ARHGAP6O43182 974 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 STX10O60499 249 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 SHMT1P34896 483 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 MAP2K2P36507 400 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 ADCY7P51828 1080 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 MRPL12P52815 198 aaKnown RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 KCNC4Q03721 635 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 LRMPQ12912 555 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TBX2Q13207 712 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TRIM14Q14142 442 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 PTPN14Q15678 1187 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TPD52L1Q16890 204 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TMEM266Q2M3C6 531 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 SLC35G1Q2M3R5 365 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 RRAGBQ5VZM2 374 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 CNNM4Q6P4Q7 775 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 BRICD5Q6PL45 260 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 MOXD1Q6UVY6 613 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 TMEM179Q6ZVK1 233 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 CCAR2Q8N163 923 aaKnown RBP9.5□□□□□ -0.89
VTI1A-207ENST00000489357 KCTD17Q8N5Z5 321 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 THAP11Q96EK4 314 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 CCDC51Q96ER9 411 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 RIC8AQ9NPQ8 531 aa9.5□□□□□ -0.89
VTI1A-207ENST00000489357 ATAD5Q96QE3 1844 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 MYH4Q9Y623 1939 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 A0A087WWV3 80 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 WNT7AO00755 349 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ZBTB5O15062 677 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ZSCAN12O43309 604 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 CTIFO43310 598 aaKnown RBP9.49□□□□□ -0.89
VTI1A-207ENST00000489357 LILRB3O75022 631 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 RHOBTB3O94955 611 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
VTI1A-207ENST00000489357 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ATP1A3P13637 1013 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms