RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 FOXP1Q9H334 677 aaPredicted RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 ZNHIT6Q9NWK9 470 aaKnown RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 SORBS3O60504 671 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 TNNI2P48788 182 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 SMTNP53814 917 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 SEC24CP53992 1094 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 PAK1Q13153 545 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 EPN3Q9H201 632 aa12.98□□□□□ -0.33
SMTN-218ENST00000489337 ATXN2Q99700 1313 aaKnown RBP12.98□□□□□ -0.33
SMTN-218ENST00000489337 CCDC189A1A4V9 331 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 KRT2P35908 639 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 PPARDQ03181 441 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 UBE2SQ16763 222 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 ZNF473Q8WTR7 871 aaKnown RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 SCLT1Q96NL6 688 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 ZIM3Q96PE6 472 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 ZNF408Q9H9D4 720 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 ANO9A1A5B4 782 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 EMBQ6PCB8 327 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 NELFBQ8WX92 580 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 VCPKMTQ9H867 229 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 MAGEC2Q9UBF1 373 aaPredicted RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 TROAPQ12815 778 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
SMTN-218ENST00000489337 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
SMTN-218ENST00000489337 FRMD3A2A2Y4 597 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
SMTN-218ENST00000489337 VAV2P52735 878 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 CCDC174Q6PII3 467 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 CCDC121Q6ZUS5 278 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 SPATA4Q8NEY3 305 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 SLC40A1Q9NP59 571 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 MYH10P35580 1976 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 FAM170AA1A519 330 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 PP2D1A8MPX8 630 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 E7EVH7 732 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 PPP1R37O75864 691 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 IL1R1P14778 569 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
SMTN-218ENST00000489337 PAX7P23759 505 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 CXCR5P32302 372 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 ECE1P42892 770 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.33
SMTN-218ENST00000489337 CXCL9Q07325 125 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 E2F5Q15329 346 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 ALX1Q15699 326 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 MMGT1Q8N4V1 131 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
SMTN-218ENST00000489337 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
SMTN-218ENST00000489337 GPR75-ASB3A0A0A6YYF3 556 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.34
SMTN-218ENST00000489337 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.34
SMTN-218ENST00000489337 APBA1Q02410 837 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 SEC23AQ15436 765 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 SNCBQ16143 134 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 WDR59Q6PJI9 974 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 PODNQ7Z5L7 613 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 YTHDF3Q7Z739 585 aaKnown RBP12.96□□□□□ -0.34
SMTN-218ENST00000489337 STIM2Q9P246 746 aa12.96□□□□□ -0.34
SMTN-218ENST00000489337 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.34
SMTN-218ENST00000489337 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
SMTN-218ENST00000489337 NR1D1P20393 614 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 SLC1A4P43007 532 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
SMTN-218ENST00000489337 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
SMTN-218ENST00000489337 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 SNX12Q9UMY4 172 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
SMTN-218ENST00000489337 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 C8orf74Q6P047 294 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 NLRP14Q86W24 1093 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 SMCR8Q8TEV9 937 aaPredicted RBP12.95□□□□□ -0.34
SMTN-218ENST00000489337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMTN-218ENST00000489337 SMARCAL1Q9NZC9 954 aa12.95□□□□□ -0.34
SMTN-218ENST00000489337 PPP1R12AO14974 1030 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms