RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 FBXO2Q9UK22 296 aaPredicted RBP10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 PARP14Q460N5 1801 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 CCDC194A0A1B0GVG4 234 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 FAM205CA6NFA0 338 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 BMP15O95972 392 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 NOP2P46087 812 aaKnown RBP10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 TOB1P50616 345 aaPredicted RBP10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 BACE1P56817 501 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 VSNL1P62760 191 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 SPP2Q13103 211 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 QRICH1Q2TAL8 776 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 ANKRD13AQ8IZ07 590 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 AMNQ9BXJ7 453 aa10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 NAA15Q9BXJ9 866 aaKnown RBP10.06□□□□□ -0.8
EXOSC1-211ENST00000489158 M0R2N6 131 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 PTPREP23469 700 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 STX17P56962 302 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 SNAP25P60880 206 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 MTMR2Q13614 643 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 TUBB2AQ13885 445 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 CASP8Q14790 479 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 ARMC9Q7Z3E5 817 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 KRT25Q7Z3Z0 450 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 LDHDQ86WU2 507 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 TUBB2BQ9BVA1 445 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 ZHX2Q9Y6X8 837 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 PTPRFP10586 1907 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
EXOSC1-211ENST00000489158 TRIM75PA6NK02 468 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PHACTR2O75167 634 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ABL1P00519 1130 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CASP14P31944 242 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ADCY7P51828 1080 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 DGKZQ13574 1117 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 USH1GQ495M9 461 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 NOM1Q5C9Z4 860 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 KLHL10Q6JEL2 608 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 MSL3Q8N5Y2 521 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 TRIML1Q8N9V2 468 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ACRBPQ8NEB7 543 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 RANBP17Q9H2T7 1088 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ADAMTS3O15072 1205 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 MFAP3LO75121 409 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 RPS6KA5O75582 802 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PBX1P40424 430 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 MRPL12P52815 198 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 FKBP1BP68106 108 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PPATQ06203 517 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 VGLL4Q14135 290 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 USP49Q70CQ1 688 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PRPF38AQ8NAV1 312 aaKnown RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 FAM71BQ8TC56 605 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 CUL5Q93034 780 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 NAPGQ99747 312 aaPredicted RBP10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 SLF1Q9BQI6 1058 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 TMOD4Q9NZQ9 345 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PCDHA6Q9UN73 950 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 AFG3L2Q9Y4W6 797 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PCDHA8Q9Y5H6 950 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 PCDHA1Q9Y5I3 950 aa10.04□□□□□ -0.8
EXOSC1-211ENST00000489158 MYPNQ86TC9 1320 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 LRRIQ3A6PVS8 624 aaPredicted RBP10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 VCAM1P19320 739 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 TUBB4BP68371 445 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 TTC38Q5R3I4 469 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 SPATA1Q5VX52 437 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 KANK3Q6NY19 840 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 GOLGA6L1Q8N7Z2 621 aa10.03□□□□□ -0.8
EXOSC1-211ENST00000489158 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms