RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF318Q5VUA4 2279 aa18.97■□□□□ 0.63
USP48-210ENST00000489108 RSPH10B2B2RC85 870 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 UPP2O95045 317 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 RSPH10BP0C881 870 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 IRS1P35568 1242 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 THPOP40225 353 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 COL19A1Q14993 1142 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 PLEKHG4Q58EX7 1191 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 EMID1Q96A84 441 aaPredicted RBP18.96■□□□□ 0.63
USP48-210ENST00000489108 SNX27Q96L92 541 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 TTC14Q96N46 770 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 YME1L1Q96TA2 773 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 UPF3BQ9BZI7 483 aaKnown RBP18.96■□□□□ 0.63
USP48-210ENST00000489108 NSUN3Q9H649 340 aaKnown RBP18.96■□□□□ 0.63
USP48-210ENST00000489108 EMSYQ7Z589 1322 aa18.96■□□□□ 0.63
USP48-210ENST00000489108 C5orf42Q9H799 3197 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 FGAP02671 866 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 LTBRP36941 435 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 ARHGEF16Q5VV41 709 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 TOP1MTQ969P6 601 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 MFSD14AQ96MC6 490 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 PHOX2BQ99453 314 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 OSBPL7Q9BZF2 842 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 MRVI1Q9Y6F6 885 aa18.95■□□□□ 0.62
USP48-210ENST00000489108 NLRC5Q86WI3 1866 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 TRIOO75962 3097 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 SORBS3O60504 671 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 EIF3JO75822 258 aaKnown RBP18.94■□□□□ 0.62
USP48-210ENST00000489108 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
USP48-210ENST00000489108 CDC37Q16543 378 aaPredicted RBP18.94■□□□□ 0.62
USP48-210ENST00000489108 SERINC5Q86VE9 423 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 FBXO11Q86XK2 927 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 MAF1Q9H063 256 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 ABCB11O95342 1321 aa18.94■□□□□ 0.62
USP48-210ENST00000489108 PPFIA4O75335 1185 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 NR3C2P08235 984 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 HOXD8P13378 290 aaPredicted RBP18.93■□□□□ 0.62
USP48-210ENST00000489108 CLUL1Q15846 466 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 GPATCH4Q5T3I0 446 aaKnown RBP18.93■□□□□ 0.62
USP48-210ENST00000489108 RPAINQ86UA6 219 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 MCF2L2Q86YR7 1114 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 MUTYHQ9UIF7 546 aa18.93■□□□□ 0.62
USP48-210ENST00000489108 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.92■□□□□ 0.62
USP48-210ENST00000489108 HAND2P61296 217 aa18.92■□□□□ 0.62
USP48-210ENST00000489108 DLX2Q07687 328 aaPredicted RBP18.92■□□□□ 0.62
USP48-210ENST00000489108 MYSM1Q5VVJ2 828 aa18.92■□□□□ 0.62
USP48-210ENST00000489108 SEPT8Q92599 483 aa18.92■□□□□ 0.62
USP48-210ENST00000489108 ATP6V0A1Q93050 837 aa18.92■□□□□ 0.62
USP48-210ENST00000489108 PXMP2Q9NR77 195 aa18.92■□□□□ 0.62
USP48-210ENST00000489108 NCK2O43639 380 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 SMAD2Q15796 467 aaKnown RBP18.91■□□□□ 0.62
USP48-210ENST00000489108 CTC1Q2NKJ3 1217 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 HSDL1Q3SXM5 330 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 HERC4Q5GLZ8 1057 aaPredicted RBP18.91■□□□□ 0.62
USP48-210ENST00000489108 RNF135Q8IUD6 432 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 ADGRF4Q8IZF3 695 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 MIER1Q8N108 512 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 C16orf70Q9BSU1 422 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 HELLSQ9NRZ9 838 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 RCAN3Q9UKA8 241 aa18.91■□□□□ 0.62
USP48-210ENST00000489108 MYH6P13533 1939 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 ATG2AQ2TAZ0 1938 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 C17orf102A2RUQ5 167 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 MBTPS2O43462 519 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 RGS20O76081 388 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 MX1P20591 662 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 CELF3Q5SZQ8 465 aaKnown RBP18.9■□□□□ 0.62
USP48-210ENST00000489108 MFSD6Q6ZSS7 791 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 IFIH1Q9BYX4 1025 aaKnown RBP18.9■□□□□ 0.62
USP48-210ENST00000489108 MRPL11Q9Y3B7 192 aaKnown RBP18.9■□□□□ 0.62
USP48-210ENST00000489108 TECTAO75443 2155 aa18.9■□□□□ 0.62
USP48-210ENST00000489108 RALGAPA2Q2PPJ7 1873 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 TREHO43280 583 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 CFBP00751 764 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 CTSHP09668 335 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 HSPD1P10809 573 aaKnown RBP18.89■□□□□ 0.61
USP48-210ENST00000489108 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
USP48-210ENST00000489108 SP2Q02086 613 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 HYAL1Q12794 435 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 QRICH1Q2TAL8 776 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 IER5LQ5T953 404 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 PRSS33Q8NF86 280 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 VAT1LQ9HCJ6 419 aa18.89■□□□□ 0.61
USP48-210ENST00000489108 GRM6O15303 877 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 GGPS1O95749 300 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 CTNNB1P35222 781 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 GTF2F1P35269 517 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP48-210ENST00000489108 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 FIBCD1Q8N539 461 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 EDAQ92838 391 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 POP1Q99575 1024 aaKnown RBP18.88■□□□□ 0.61
USP48-210ENST00000489108 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 IGFLR1Q9H665 355 aa18.88■□□□□ 0.61
USP48-210ENST00000489108 A0A0D9SFI3 127 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms