RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FERD3LQ96RJ6 166 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 UBL7Q96S82 380 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 KCNF1Q9H3M0 494 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 GFRA2O00451 464 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 PGRP06401 933 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 TRIM27P14373 513 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 PLCG1P19174 1290 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 HOXA10P31260 410 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 KIF23Q02241 960 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 SF3B3Q15393 1217 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 FBXW10Q5XX13 1052 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 FAM46AQ96IP4 442 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 MEGF10Q96KG7 1140 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 WNT10AQ9GZT5 417 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 GPRC5DQ9NZD1 345 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 PGAP2Q9UHJ9 254 aa9.97□□□□□ -0.81
TRAPPC12-221ENST00000489032 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 DHX15O43143 795 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 SSBP05455 408 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 BMP3P12645 472 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 GRK4P32298 578 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 CTSWP56202 376 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 RGMBQ6NW40 437 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 NIM1KQ8IY84 436 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 SMYD4Q8IYR2 804 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.96□□□□□ -0.821e-7■■□□□ 13.8
TRAPPC12-221ENST00000489032 PLA2G12BQ9BX93 195 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 GINM1Q9NU53 330 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 FAM105AQ9NUU6 356 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 PCDHB14Q9Y5E9 798 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 ABCC4O15439 1325 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 COL4A5P29400 1685 aa9.96□□□□□ -0.82
TRAPPC12-221ENST00000489032 BBOX1O75936 387 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 GNAI3P08754 354 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 GRAPQ13588 217 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 MAP7Q14244 749 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 ZBTB37Q5TC79 503 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 GRAPLQ8TC17 118 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 MYRFLQ96LU7 910 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 HDAC9Q9UKV0 1011 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 PCOLCE2Q9UKZ9 415 aa9.95□□□□□ -0.82
TRAPPC12-221ENST00000489032 LAMB2P55268 1798 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 UTYO14607 1347 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 IMPDH2P12268 514 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 CASP7P55210 303 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 ITPRIPQ8IWB1 547 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 C2orf69Q8N8R5 385 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 FBLIM1Q8WUP2 373 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 TP53INP1Q96A56 240 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 CHMP4BQ9H444 224 aaKnown RBP9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 PRKAG2Q9UGJ0 569 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 STRIP2Q9ULQ0 834 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 DAGLAQ9Y4D2 1042 aa9.94□□□□□ -0.82
TRAPPC12-221ENST00000489032 DDX60Q8IY21 1712 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 SNED1Q8TER0 1413 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 ANKRD18BA2A2Z9 1011 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 NBPF7P0C2Y1 421 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 MAP4P27816 1152 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 IGHMBP2P38935 993 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 RPS8P62241 208 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 RING1Q06587 406 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 CCDC57Q2TAC2 916 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 HID1Q8IV36 788 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 TMEM57Q8N5G2 664 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 SLC17A8Q8NDX2 589 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 TTLL11Q8NHH1 800 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 USP44Q9H0E7 712 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 GBA2Q9HCG7 927 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 ADAM30Q9UKF2 790 aa9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 POLR3KQ9Y2Y1 108 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-221ENST00000489032 RTL9Q8NET4 1388 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 FAM95CA0A1B0GW59 222 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 HTR3BO95264 441 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 CSF1RP07333 972 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 ATP2B1P20020 1258 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 SOX9P48436 509 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 GMPSP49915 693 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 NFKBIBQ15653 356 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 PLA2G4EQ3MJ16 856 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 SGO2Q562F6 1265 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 CDPF1Q6NVV7 123 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms