RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ZNF76P36508 570 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 BEX3Q00994 111 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 ARHGAP1Q07960 439 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 TRIM29Q14134 588 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 RNF180Q86T96 592 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 TLK2Q86UE8 772 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 FBXO18Q8NFZ0 1043 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
FDPS-213ENST00000489003 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
FDPS-213ENST00000489003 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
FDPS-213ENST00000489003 MAFGO15525 162 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 FIBPO43427 364 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 ARP10275 920 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 COL6A1P12109 1028 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 CST5P28325 142 aaPredicted RBP17.28■□□□□ 0.36
FDPS-213ENST00000489003 KRT2P35908 639 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 USP11P51784 963 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 NR5A1Q13285 461 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 KCNA10Q16322 511 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
FDPS-213ENST00000489003 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
FDPS-213ENST00000489003 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 OR6J1Q8NGC5 347 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 TBCKQ8TEA7 893 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
FDPS-213ENST00000489003 BRCA2P51587 3418 aa17.28■□□□□ 0.36
FDPS-213ENST00000489003 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 GH1P01241 217 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 CIITAP33076 1130 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
FDPS-213ENST00000489003 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
FDPS-213ENST00000489003 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
FDPS-213ENST00000489003 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
FDPS-213ENST00000489003 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
FDPS-213ENST00000489003 TNFRSF25Q93038 417 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 SENP7Q9BQF6 1050 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 PHF24Q9UPV7 400 aa17.27■□□□□ 0.36
FDPS-213ENST00000489003 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 A6NJR5 290 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 SORBS3O60504 671 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 GGPS1O95749 300 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 ASGR1P07306 291 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
FDPS-213ENST00000489003 ACLYP53396 1101 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 MTMR1Q13613 665 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 NEDD9Q14511 834 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 INF2Q27J81 1249 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 PIK3AP1Q6ZUJ8 805 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 NIPA1Q7RTP0 329 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 CDHR1Q96JP9 859 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 SENP6Q9GZR1 1112 aaPredicted RBP17.26■□□□□ 0.35
FDPS-213ENST00000489003 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
FDPS-213ENST00000489003 FAM205CA6NFA0 338 aa17.25■□□□□ 0.35
FDPS-213ENST00000489003 KCNA2P16389 499 aa17.25■□□□□ 0.35
FDPS-213ENST00000489003 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
FDPS-213ENST00000489003 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
FDPS-213ENST00000489003 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
FDPS-213ENST00000489003 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
FDPS-213ENST00000489003 MLXIPQ9HAP2 919 aa17.25■□□□□ 0.35
FDPS-213ENST00000489003 CYP3A7-CYP3A51PA0A087WV96 503 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 MOXD2PA6NHM9 499 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 ZEB2O60315 1214 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 CYP3A7P24462 503 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 CPT1AP50416 773 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
FDPS-213ENST00000489003 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 LENG9Q96B70 501 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 AGO4Q9HCK5 861 aaKnown RBP17.24■□□□□ 0.35
FDPS-213ENST00000489003 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 PKD2L1Q9P0L9 805 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 TELO2Q9Y4R8 837 aa17.24■□□□□ 0.35
FDPS-213ENST00000489003 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
FDPS-213ENST00000489003 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 MMP3P08254 477 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 MYL3P08590 195 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 PRR16Q569H4 304 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 BRDTQ58F21 947 aaPredicted RBP17.23■□□□□ 0.35
FDPS-213ENST00000489003 METTL7BQ6UX53 244 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
FDPS-213ENST00000489003 GIMAP8Q8ND71 665 aaPredicted RBP17.23■□□□□ 0.35
FDPS-213ENST00000489003 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms