RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 YBX3P16989 372 aaKnown RBP eCLIP5.89□□□□□ -1.474e-9■□□□□ 11.3
SSR1-209ENST00000488834 LINC00310P59036 64 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 ZNF385BQ569K4 471 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 FAM47CQ5HY64 1035 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 CIAPIN1Q6FI81 312 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 ETV3LQ6ZN32 361 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 NOP9Q86U38 636 aaKnown RBP5.89□□□□□ -1.47
SSR1-209ENST00000488834 ZC3H18Q86VM9 953 aaKnown RBP5.89□□□□□ -1.47
SSR1-209ENST00000488834 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 PIP4K2CQ8TBX8 421 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.89□□□□□ -1.47
SSR1-209ENST00000488834 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
SSR1-209ENST00000488834 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 IPPKQ9H8X2 491 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 SLC52A2Q9HAB3 445 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 CATSPERZQ9NTU4 200 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 MYOTQ9UBF9 498 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 KCTD3Q9Y597 815 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 PCDHA5Q9Y5H7 936 aa5.89□□□□□ -1.47
SSR1-209ENST00000488834 ESYT3A0FGR9 886 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 GSTA4O15217 222 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 RAPGEF3O95398 923 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 CRTAMO95727 393 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 COL6A2P12110 1019 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 PI3P19957 117 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 SQSTM1Q13501 440 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 IGDCC3Q8IVU1 814 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 NLGN1Q8N2Q7 840 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 ZSCAN18Q8TBC5 510 aaPredicted RBP5.88□□□□□ -1.47
SSR1-209ENST00000488834 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 RNPC3Q96LT9 517 aaKnown RBP5.88□□□□□ -1.47
SSR1-209ENST00000488834 KANSL2Q9H9L4 492 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 NCOA5Q9HCD5 579 aaKnown RBP5.88□□□□□ -1.47
SSR1-209ENST00000488834 CD320Q9NPF0 282 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
SSR1-209ENST00000488834 MRPL42Q9Y6G3 142 aaKnown RBP5.88□□□□□ -1.47
SSR1-209ENST00000488834 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 PLD2O14939 933 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 ASMTLO95671 621 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 MC3RP41968 323 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 LIMS1P48059 325 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 DNM2P50570 870 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 SSPNQ14714 243 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 CD300LDQ6UXZ3 194 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 OTOP3Q7RTS5 596 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 BRAPQ7Z569 592 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 TRIM48Q8IWZ4 208 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 PHOSPHO1Q8TCT1 267 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 APPBP2Q92624 585 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 FBXW5Q969U6 566 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 SMOC1Q9H4F8 434 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 SLC6A20Q9NP91 592 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
SSR1-209ENST00000488834 IRS2Q9Y4H2 1338 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 SLC27A2O14975 620 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 CDC45O75419 566 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 RASGRP1O95267 797 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 CYP2C8P10632 490 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 KRT15P19012 456 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 CACNB2Q08289 660 aaPredicted RBP5.86□□□□□ -1.47
SSR1-209ENST00000488834 TCEA2Q15560 299 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 CRY1Q16526 586 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 EMC4Q5J8M3 183 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 LRRC56Q8IYG6 542 aaPredicted RBP5.86□□□□□ -1.47
SSR1-209ENST00000488834 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 SLC7A14Q8TBB6 771 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 PWWP2AQ96N64 755 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 IRF2BPLQ9H1B7 796 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 FANCLQ9NW38 375 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 DSEQ9UL01 958 aa5.86□□□□□ -1.47
SSR1-209ENST00000488834 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 TCRBV5S2A0A599 114 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 ARVCFO00192 962 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 PPP1R12AO14974 1030 aaPredicted RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 STAT5AP42229 794 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 NKX3-2P78367 333 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 FOXO4P98177 505 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 TRIM61Q5EBN2 209 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 CYP4F22Q6NT55 531 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 B3GNT8Q7Z7M8 397 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 FAM126BQ8IXS8 530 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 SYNPOQ8N3V7 929 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 ARRDC4Q8NCT1 418 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 CPA5Q8WXQ8 436 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 TOE1Q96GM8 510 aaKnown RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 NGRNQ9NPE2 291 aaKnown RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
SSR1-209ENST00000488834 PMF1-BGLAPU3KQ54 211 aa5.85□□□□□ -1.47
SSR1-209ENST00000488834 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 NKRFO15226 690 aaKnown RBP eCLIP5.84□□□□□ -1.47
SSR1-209ENST00000488834 OPA1O60313 960 aa5.84□□□□□ -1.47
SSR1-209ENST00000488834 TADA3O75528 432 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms