RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MAFGO15525 162 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 ZEB2O60315 1214 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 PGK1P00558 417 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 GH1P01241 217 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 CYP3A4P08684 503 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 NR5A1Q13285 461 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 INF2Q27J81 1249 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 SPRYD3Q8NCJ5 442 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 MLXIPQ9HAP2 919 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 DDX41Q9UJV9 622 aaKnown RBP17.9■□□□□ 0.46
C9orf3-219ENST00000488186 UBIAD1Q9Y5Z9 338 aa17.9■□□□□ 0.46
C9orf3-219ENST00000488186 TNRC18O15417 2968 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 SPATA31C2B4DYI2 1134 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 RGS20O76081 388 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 ITGB5P18084 799 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 ICAM3P32942 547 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 NKX3-2P78367 333 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 NEDD9Q14511 834 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 GNASQ5JWF2 1037 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 GJC2Q5T442 439 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 PLA2G4DQ86XP0 818 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 GIMAP8Q8ND71 665 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 COPS5Q92905 334 aa17.89■□□□□ 0.45
C9orf3-219ENST00000488186 NAP1L4Q99733 375 aaKnown RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 FOXP1Q9H334 677 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 GNEQ9Y223 722 aaKnown RBP17.89■□□□□ 0.45
C9orf3-219ENST00000488186 SORBS3O60504 671 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 FARP2O94887 1054 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-219ENST00000488186 ARIH2O95376 493 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-219ENST00000488186 CPT1AP50416 773 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 GJA9P57773 515 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 LAMC2Q13753 1193 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 LRRC41Q15345 812 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 LETM2Q2VYF4 491 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 PRR16Q569H4 304 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 TMEM63BQ5T3F8 832 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 CCDC62Q6P9F0 684 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 NIPA1Q7RTP0 329 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 NEK8Q86SG6 692 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 PCSK9Q8NBP7 692 aaKnown RBP17.88■□□□□ 0.45
C9orf3-219ENST00000488186 PKD2L1Q9P0L9 805 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 SYNRGQ9UMZ2 1314 aa17.88■□□□□ 0.45
C9orf3-219ENST00000488186 LRRC37A2A6NM11 1700 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 VPS37CA5D8V6 355 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-219ENST00000488186 DNM1LO00429 736 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 MEIS1O00470 390 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 ADCY6O43306 1168 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 MARCH6O60337 910 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 GGPS1O95749 300 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 ATP2B1P20020 1258 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-219ENST00000488186 FSCN1Q16658 493 aaKnown RBP17.87■□□□□ 0.45
C9orf3-219ENST00000488186 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 CYP2W1Q8TAV3 490 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 KCNH7Q9NS40 1196 aa17.87■□□□□ 0.45
C9orf3-219ENST00000488186 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
C9orf3-219ENST00000488186 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 NOP56O00567 594 aaKnown RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 ARP10275 920 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 COL6A1P12109 1028 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 UBA1P22314 1058 aaKnown RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 CIITAP33076 1130 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 BEX3Q00994 111 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 CYFIP1Q7L576 1253 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 NOSTRINQ8IVI9 506 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 CRYGNQ8WXF5 182 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 SPATA33Q96N06 139 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 SENP7Q9BQF6 1050 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 SDF4Q9BRK5 362 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 UPF3AQ9H1J1 476 aaKnown RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 DAXXQ9UER7 740 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-219ENST00000488186 TCEAL9Q9UHQ7 104 aa17.86■□□□□ 0.45
C9orf3-219ENST00000488186 FAM86B1E9PN63 330 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 ADAMTS4O75173 837 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 FAM86B2P0C5J1 330 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 GCFC2P16383 781 aaKnown RBP17.85■□□□□ 0.45
C9orf3-219ENST00000488186 PTGS1P23219 599 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 CST5P28325 142 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-219ENST00000488186 SP2Q02086 613 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 KCNA10Q16322 511 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 TNFRSF25Q93038 417 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 ZNF577Q9BSK1 485 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 TSEN34Q9BSV6 310 aaKnown RBP17.85■□□□□ 0.45
C9orf3-219ENST00000488186 HTATIP2Q9BUP3 242 aa17.85■□□□□ 0.45
C9orf3-219ENST00000488186 AGO4Q9HCK5 861 aaKnown RBP17.85■□□□□ 0.45
C9orf3-219ENST00000488186 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
C9orf3-219ENST00000488186 MYL3P08590 195 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 SP4Q02446 784 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 SEMA3FQ13275 785 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 EARS2Q5JPH6 523 aaKnown RBP17.84■□□□□ 0.45
C9orf3-219ENST00000488186 MYSM1Q5VVJ2 828 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 MOXD1Q6UVY6 613 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 KLHDC9Q8NEP7 349 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 AFG1LQ8WV93 481 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 PAWRQ96IZ0 340 aaKnown RBP17.84■□□□□ 0.45
C9orf3-219ENST00000488186 SENP6Q9GZR1 1112 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms