RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 CHMP4BP1P59074 171 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 SP2Q02086 613 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 FAM126BQ8IXS8 530 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 TRIM22Q8IYM9 498 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 PPP1R13LQ8WUF5 828 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 IL17RAQ96F46 866 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 TMEM260Q9NX78 707 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 TPCN1Q9ULQ1 816 aa27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 LAMA2P24043 3122 aaKnown RBP27.13■■□□□ 1.93
RHBDD3-205ENST00000488106 TLR3O15455 904 aaKnown RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 KPNA6O60684 536 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 SEMA3FQ13275 785 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 LAMC2Q13753 1193 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 CELF3Q5SZQ8 465 aaKnown RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 XRRA1Q6P2D8 792 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 SLC43A3Q8NBI5 491 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 CCDC12Q8WUD4 166 aaPredicted RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 EMID1Q96A84 441 aaPredicted RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 ANO3Q9BYT9 981 aa27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 UBE2OQ9C0C9 1292 aaKnown RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 SLKQ9H2G2 1235 aaPredicted RBP27.12■■□□□ 1.93
RHBDD3-205ENST00000488106 FIBPO43427 364 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 TGFB3P10600 412 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 SSRP1Q08945 709 aaKnown RBP27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 ANKRD1Q15327 319 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 MYSM1Q5VVJ2 828 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 PPTC7Q8NI37 304 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 SPATA33Q96N06 139 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 GLT8D2Q9H1C3 349 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 ALDH8A1Q9H2A2 487 aaPredicted RBP27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 VPS54Q9P1Q0 977 aa27.11■■□□□ 1.93
RHBDD3-205ENST00000488106 KIAA0355O15063 1070 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 SLC34A2O95436 690 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 ZNF286BP0CG31 522 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 RAG1P15918 1043 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 ICAM3P32942 547 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 NEK4P51957 841 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 SCRN1Q12765 414 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 DGKDQ16760 1214 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 FAM47CQ5HY64 1035 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 JAKMIP3Q5VZ66 844 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 CPLX2Q6PUV4 134 aaKnown RBP27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 NLRX1Q86UT6 975 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 BADQ92934 168 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 MLXIPQ9HAP2 919 aa27.1■■□□□ 1.93
RHBDD3-205ENST00000488106 MYH9P35579 1960 aaKnown RBP27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 ESYT2A0FGR8 921 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 SPATA31C2B4DYI2 1134 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 FOSP01100 380 aaPredicted RBP27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 ITGB8P26012 769 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 BMP8BP34820 402 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 AP3B2Q13367 1082 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 NBPF20Q3BBV1 942 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 TEX2Q8IWB9 1127 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 CCDC148Q8NFR7 591 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 ZMYND12Q9H0C1 365 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 BCAS3Q9H6U6 928 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 C6orf50Q9HD87 102 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 TBX21Q9UL17 535 aa27.09■■□□□ 1.93
RHBDD3-205ENST00000488106 ADAMTS3O15072 1205 aa27.08■■□□□ 1.93
RHBDD3-205ENST00000488106 CLK2P49760 499 aaKnown RBP27.08■■□□□ 1.93
RHBDD3-205ENST00000488106 HSDL1Q3SXM5 330 aa27.08■■□□□ 1.93
RHBDD3-205ENST00000488106 GPRASP2Q96D09 838 aa27.08■■□□□ 1.93
RHBDD3-205ENST00000488106 TRPV6Q9H1D0 765 aa27.08■■□□□ 1.93
RHBDD3-205ENST00000488106 B4GALT4O60513 344 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 PFKFB2O60825 505 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 CD4P01730 458 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 ITGB5P18084 799 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 NEDD9Q14511 834 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 CYFIP1Q7L576 1253 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 REXO1Q8N1G1 1221 aaKnown RBP27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 SEZ6LQ9BYH1 1024 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 PPP1R12CQ9BZL4 782 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 PKD2L1Q9P0L9 805 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 UBIAD1Q9Y5Z9 338 aa27.07■■□□□ 1.92
RHBDD3-205ENST00000488106 DTNBO60941 627 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 DEXIO95424 95 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 LARGE1O95461 756 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 SP4Q02446 784 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 MTMR1Q13613 665 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 KAT2BQ92831 832 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 TRMT13Q9NUP7 481 aaKnown RBP27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 SZT2Q5T011 3432 aa27.06■■□□□ 1.92
RHBDD3-205ENST00000488106 NOP56O00567 594 aaKnown RBP27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 CDKL5O76039 1030 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 GNA11P29992 359 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 SREBF1P36956 1147 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 METTL7BQ6UX53 244 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 RASGRP4Q8TDF6 673 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 AIFM3Q96NN9 605 aa27.05■■□□□ 1.92
RHBDD3-205ENST00000488106 A0A1W2PPC1 479 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 NFRKBQ6P4R8 1299 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 TDHQ8IZJ6 230 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 NECAB1Q8N987 351 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 CDHR1Q96JP9 859 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 ALG1Q9BT22 464 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 JADE2Q9NQC1 790 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 SH3GLB2Q9NR46 395 aa27.04■■□□□ 1.92
RHBDD3-205ENST00000488106 ATP9AO75110 1047 aa27.03■■□□□ 1.92
RHBDD3-205ENST00000488106 F2P00734 622 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms