RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 AFG1LQ8WV93 481 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 MXRA8Q9BRK3 442 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 GLT8D2Q9H1C3 349 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 TDP2O95551 362 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 GGPS1O95749 300 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 KRT2P35908 639 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 ATN1P54259 1190 aaPredicted RBP19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 SP4Q02446 784 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 SNX21Q969T3 373 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 SENP6Q9GZR1 1112 aaPredicted RBP19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 AP5M1Q9H0R1 490 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 JADE2Q9NQC1 790 aa19.56■□□□□ 0.72
SHROOM1-205ENST00000488072 IGLV3-22A0A075B6J6 115 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 COL6A1P12109 1028 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 ICAM3P32942 547 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 ZNF76P36508 570 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 FSCN1Q16658 493 aaKnown RBP19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 GNASQ5JWF2 1037 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 CXCL17Q6UXB2 119 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 CYFIP1Q7L576 1253 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
SHROOM1-205ENST00000488072 DNM1LO00429 736 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 MEIS1O00470 390 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 FIBPO43427 364 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 GH1P01241 217 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 MYL3P08590 195 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 CYP3A4P08684 503 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 KCNA2P16389 499 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 XBP1P17861 261 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 PSMC6P62333 389 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 ITGB3BPQ13352 177 aaPredicted RBP19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 CELF3Q5SZQ8 465 aaKnown RBP19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 XRRA1Q6P2D8 792 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 RNF180Q86T96 592 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 FBXO18Q8NFZ0 1043 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 LENG9Q96B70 501 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 C11orf49Q9H6J7 331 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
SHROOM1-205ENST00000488072 ASGR1P07306 291 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 RGS19P49795 217 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 ACLYP53396 1101 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 MTMR1Q13613 665 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 TRIM29Q14134 588 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 NONOQ15233 471 aaKnown RBP eCLIP19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 PRR16Q569H4 304 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 GALNT17Q6IS24 598 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 KRT25Q7Z3Z0 450 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 NLRX1Q86UT6 975 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 DHX37Q8IY37 1157 aaKnown RBP19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 GPRASP2Q96D09 838 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 AGO4Q9HCK5 861 aaKnown RBP19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
SHROOM1-205ENST00000488072 CCDC194A0A1B0GVG4 234 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 A0A1W2PQ45 241 aaPredicted RBP19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 A0A1W2PQY0 241 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 KBTBD13C9JR72 458 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 DDX39AO00148 427 aaKnown RBP19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 SLC37A4O43826 429 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 MMP3P08254 477 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 ATP2B1P20020 1258 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 NKX3-2P78367 333 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 LRRC26Q2I0M4 334 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 LETM2Q2VYF4 491 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 GNPTABQ3T906 1256 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 NECAB2Q7Z6G3 386 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
SHROOM1-205ENST00000488072 GRIN2DO15399 1336 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 KIAA1217Q5T5P2 1943 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 STAM2O75886 525 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 ZNF286BP0CG31 522 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 CST5P28325 142 aaPredicted RBP19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 CIITAP33076 1130 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 CHMP4BP1P59074 171 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 NBR1Q14596 966 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 SPATA33Q96N06 139 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 Q9Y3F1 56 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 MYH7BA7E2Y1 1941 aa19.51■□□□□ 0.71
SHROOM1-205ENST00000488072 A6NJR5 290 aa19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 NKRFO15226 690 aaKnown RBP eCLIP19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 DHX15O43143 795 aaKnown RBP19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 IL27Q8NEV9 243 aa19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 MLXIPQ9HAP2 919 aa19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 SPC25Q9HBM1 224 aa19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
SHROOM1-205ENST00000488072 MSH4O15457 936 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 CCNE2O96020 404 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 PURAQ00577 322 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 LAMC2Q13753 1193 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 TRIM50Q86XT4 487 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 TEX2Q8IWB9 1127 aa19.49■□□□□ 0.71
SHROOM1-205ENST00000488072 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms