RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 AGXT2Q9BYV1 514 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 UPF3BQ9BZI7 483 aaKnown RBP27.23■■□□□ 1.95
RNF38-208ENST00000488058 ZSWIM6Q9HCJ5 1215 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 DOCK5Q9H7D0 1870 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 STXBP3O00186 592 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 SUPT20HL2P0C7V6 817 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 ZNF286BP0CG31 522 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 CYP2C9P11712 490 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 CSF2RAP15509 400 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 ADCY7P51828 1080 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 CCL23P55773 120 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 HSDL1Q3SXM5 330 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 PPP1R18Q6NYC8 613 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 NLRX1Q86UT6 975 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 FBXL16Q8N461 479 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 RNPC3Q96LT9 517 aaKnown RBP27.22■■□□□ 1.95
RNF38-208ENST00000488058 ALG1Q9BT22 464 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 PCDHA6Q9UN73 950 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 NOD1Q9Y239 953 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 PCDHA8Q9Y5H6 950 aa27.22■■□□□ 1.95
RNF38-208ENST00000488058 hCG_1984214I3L0E3 225 aa27.21■■□□□ 1.95
RNF38-208ENST00000488058 FIBPO43427 364 aa27.21■■□□□ 1.95
RNF38-208ENST00000488058 CCT2P78371 535 aaKnown RBP27.21■■□□□ 1.95
RNF38-208ENST00000488058 XRRA1Q6P2D8 792 aa27.21■■□□□ 1.95
RNF38-208ENST00000488058 ZNF713Q8N859 430 aaPredicted RBP27.21■■□□□ 1.95
RNF38-208ENST00000488058 KAT2BQ92831 832 aa27.21■■□□□ 1.95
RNF38-208ENST00000488058 NOC4LQ9BVI4 516 aaKnown RBP27.21■■□□□ 1.95
RNF38-208ENST00000488058 EHMT1Q9H9B1 1298 aa27.21■■□□□ 1.95
RNF38-208ENST00000488058 SMCO2A6NFE2 343 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 ACRP10323 421 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 ICAM3P32942 547 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 PTPN11Q06124 597 aaPredicted RBP27.2■■□□□ 1.94
RNF38-208ENST00000488058 SEMA3FQ13275 785 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 PGBD1Q96JS3 809 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 BCAS3Q9H6U6 928 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 RIC8AQ9NPQ8 531 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 BARHL2Q9NY43 387 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 NID2Q14112 1375 aa27.2■■□□□ 1.94
RNF38-208ENST00000488058 SPATA31C2B4DYI2 1134 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 NOP56O00567 594 aaKnown RBP27.19■■□□□ 1.94
RNF38-208ENST00000488058 PPFIA3O75145 1194 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 PSEN2P49810 448 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 AKAP17AQ02040 695 aaKnown RBP27.19■■□□□ 1.94
RNF38-208ENST00000488058 TOB2Q14106 344 aaPredicted RBP27.19■■□□□ 1.94
RNF38-208ENST00000488058 NEDD9Q14511 834 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 PFKFB3Q16875 520 aaPredicted RBP27.19■■□□□ 1.94
RNF38-208ENST00000488058 CYFIP1Q7L576 1253 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 PHKBQ93100 1093 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 LARP6Q9BRS8 491 aaKnown RBP27.19■■□□□ 1.94
RNF38-208ENST00000488058 KATNAL1Q9BW62 490 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 TM6SF1Q9BZW5 370 aa27.19■■□□□ 1.94
RNF38-208ENST00000488058 SCG2P13521 617 aa27.18■■□□□ 1.94
RNF38-208ENST00000488058 PDIA3P30101 505 aaKnown RBP27.18■■□□□ 1.94
RNF38-208ENST00000488058 MFSD10Q14728 455 aa27.18■■□□□ 1.94
RNF38-208ENST00000488058 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.18■■□□□ 1.94
RNF38-208ENST00000488058 NCOA5Q9HCD5 579 aaKnown RBP27.18■■□□□ 1.94
RNF38-208ENST00000488058 PDRG1Q9NUG6 133 aa27.18■■□□□ 1.94
RNF38-208ENST00000488058 PPFIA4O75335 1185 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 SP4Q02446 784 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 PTGISQ16647 500 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 KIAA0753Q2KHM9 967 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 C7orf31Q8N865 590 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 SCLYQ96I15 445 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 WNT8AQ9H1J5 351 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 TMEM260Q9NX78 707 aa27.17■■□□□ 1.94
RNF38-208ENST00000488058 PRPF3O43395 683 aaKnown RBP27.16■■□□□ 1.94
RNF38-208ENST00000488058 F2P00734 622 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 GDF6Q6KF10 455 aaPredicted RBP27.16■■□□□ 1.94
RNF38-208ENST00000488058 GPRASP2Q96D09 838 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 SLC26A6Q9BXS9 759 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 ANO3Q9BYT9 981 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 IL23AQ9NPF7 189 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 PKD2L1Q9P0L9 805 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 HDAC6Q9UBN7 1215 aa27.16■■□□□ 1.94
RNF38-208ENST00000488058 HOXD8P13378 290 aaPredicted RBP27.15■■□□□ 1.94
RNF38-208ENST00000488058 ITGB5P18084 799 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 EVCP57679 992 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 TMEM240Q5SV17 173 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 METTL7BQ6UX53 244 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 ZNF365Q70YC5 407 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 Q7L0L9 218 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 C16orf59Q7L2K0 433 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 GLT8D2Q9H1C3 349 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 UBIAD1Q9Y5Z9 338 aa27.15■■□□□ 1.94
RNF38-208ENST00000488058 FOSP01100 380 aaPredicted RBP27.14■■□□□ 1.94
RNF38-208ENST00000488058 STK3Q13188 491 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 MTMR1Q13613 665 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 GPR153Q6NV75 609 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 PSRC1Q6PGN9 363 aaPredicted RBP27.14■■□□□ 1.94
RNF38-208ENST00000488058 SESTD1Q86VW0 696 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 DEFB123Q8N688 67 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 RETREG2Q8NC44 543 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 CDHR1Q96JP9 859 aa27.14■■□□□ 1.94
RNF38-208ENST00000488058 HAS3O00219 553 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 LGALS2P05162 132 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 NTRK3Q16288 839 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 PKN1Q16512 942 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 UTP14CQ5TAP6 766 aaKnown RBP27.13■■□□□ 1.93
RNF38-208ENST00000488058 JAKMIP3Q5VZ66 844 aa27.13■■□□□ 1.93
RNF38-208ENST00000488058 CCDC12Q8WUD4 166 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms