RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LRP10Q7Z4F1 713 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 LIMS2Q7Z4I7 341 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 ZNF227Q86WZ6 799 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 FIBCD1Q8N539 461 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 LZTR1Q8N653 840 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 TTLL6Q8N841 843 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 ST13P5Q8NFI4 369 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 PPP1R14AQ96A00 147 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 MCMBPQ9BTE3 642 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 BCAS3Q9H6U6 928 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 WHRNQ9P202 907 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 CGGBP1Q9UFW8 167 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 FHOD1Q9Y613 1164 aa4.34□□□□□ -1.71
R3HDM1-219ENST00000488035 KDM2BQ8NHM5 1336 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 VAMP4O75379 141 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 AMHP03971 560 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 CAPNS1P04632 268 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 ITGA4P13612 1032 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 ZNF143P52747 638 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 POU4F1Q01851 419 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 CYP4F3Q08477 520 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 IFRD2Q12894 506 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SQSTM1Q13501 440 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SF1Q15637 639 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 FOXB2Q5VYV0 432 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 NOP9Q86U38 636 aaKnown RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 KYQ8NBH2 561 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 BVESQ8NE79 360 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SH3TC2Q8TF17 1288 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 DDX11Q96FC9 970 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 LCORQ96JN0 433 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 MRGPRX3Q96LB0 322 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 ZDHHC15Q96MV8 337 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 FCRL3Q96P31 734 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 APBA2Q99767 749 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 C11orf84Q9BUA3 381 aaPredicted RBP4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 GBP3Q9H0R5 595 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SEMA4AQ9H3S1 761 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 ARHGEF4Q9NR80 690 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 SUGT1Q9Y2Z0 365 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 EMC9Q9Y3B6 208 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 HS3ST3A1Q9Y663 406 aa4.33□□□□□ -1.72
R3HDM1-219ENST00000488035 NPEPPSL1A6NEC2 478 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 PPM1BO75688 479 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 FAM153BP0C7A2 387 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 PPP2R2AP63151 447 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 EEF1DP3Q658K8 133 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 ARHGEF39Q8N4T4 335 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 TXNDC5Q8NBS9 432 aaKnown RBP4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 BTN2A2Q8WVV5 523 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 GORASP1Q9BQQ3 440 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 DEF6Q9H4E7 631 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 AKT3Q9Y243 479 aa4.32□□□□□ -1.72
R3HDM1-219ENST00000488035 ESYT3A0FGR9 886 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 C9orf118A6NHY6 69 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 KCNH1O95259 989 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 IFNGR1P15260 489 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 PURAQ00577 322 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 ICAM4Q14773 271 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 DPY19L1Q2PZI1 675 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 C2orf27AQ580R0 203 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 MCTP2Q6DN12 878 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 RCSD1Q6JBY9 416 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 CIR1Q86X95 450 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 TRIM59Q8IWR1 403 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 JMYQ8N9B5 988 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 RCC1LQ96I51 464 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 EXOC2Q96KP1 924 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 EPN3Q9H201 632 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 LRP2BPQ9P2M1 347 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 PTCH2Q9Y6C5 1203 aa4.31□□□□□ -1.72
R3HDM1-219ENST00000488035 A0A087WZG4 1122 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 STXBP3O00186 592 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 C8BP07358 591 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 CD3EP07766 207 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 TGFB2P61812 414 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 PRSS53Q2L4Q9 553 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 GTF2IRD2BQ6EKJ0 949 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 ETV3LQ6ZN32 361 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 GTF2IRD2Q86UP8 949 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 ZC3H18Q86VM9 953 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 ZNF669Q96BR6 464 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 CD248Q9HCU0 757 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 PPP4R1LQ9P1A2 415 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 DIS3Q9Y2L1 958 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 RWDD3Q9Y3V2 267 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 TCAF1Q9Y4C2 921 aa4.3□□□□□ -1.72
R3HDM1-219ENST00000488035 DDX3XO00571 662 aaKnown RBP eCLIP4.29□□□□□ -1.725e-14■■■■□ 20.6
R3HDM1-219ENST00000488035 NAT2P11245 290 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 SELENOPP49908 381 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 KLF10Q13118 480 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 FAM209AQ5JX71 171 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 WWC2Q6AWC2 1192 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms