RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 FAM126BQ8IXS8 530 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 FRS2Q8WU20 508 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 MRGPRX3Q96LB0 322 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 GORASP1Q9BQQ3 440 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 MRVI1Q9Y6F6 885 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 SGSM2O43147 1006 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 CYP1A1P04798 512 aaPredicted RBP6.24□□□□□ -1.41
UBR3-211ENST00000487689 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
UBR3-211ENST00000487689 THBS2P35442 1172 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 MBLAC2Q68D91 279 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 CRIP3Q6Q6R5 217 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 EEPD1Q7L9B9 569 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 MIB1Q86YT6 1006 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 PPIL6Q8IXY8 311 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 ZNF513Q8N8E2 541 aaPredicted RBP6.24□□□□□ -1.41
UBR3-211ENST00000487689 NPLOC4Q8TAT6 608 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 DPF3Q92784 378 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 WRNIP1Q96S55 665 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■□□□□ 9.6
UBR3-211ENST00000487689 SPATA6Q9NWH7 488 aaPredicted RBP6.24□□□□□ -1.41
UBR3-211ENST00000487689 ST6GALNAC2Q9UJ37 374 aa6.24□□□□□ -1.41
UBR3-211ENST00000487689 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 MROH6A6NGR9 719 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 H7BY64 318 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 HGSO14964 777 aaPredicted RBP6.23□□□□□ -1.41
UBR3-211ENST00000487689 DGKIO75912 1065 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 ITGAVP06756 1048 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 FPR2P25090 351 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 LTBRP36941 435 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 BCL6P41182 706 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 SURF1Q15526 300 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 INF2Q27J81 1249 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 ACBD5Q5T8D3 534 aaPredicted RBP6.23□□□□□ -1.41
UBR3-211ENST00000487689 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 ZNF227Q86WZ6 799 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 LCORQ96JN0 433 aaPredicted RBP6.23□□□□□ -1.41
UBR3-211ENST00000487689 CLIC6Q96NY7 704 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 PRKAG3Q9UGI9 489 aa6.23□□□□□ -1.41
UBR3-211ENST00000487689 SUSD5O60279 629 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 LSAMPQ13449 338 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 GLB1LQ6UWU2 654 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 TOE1Q96GM8 510 aaKnown RBP6.22□□□□□ -1.41
UBR3-211ENST00000487689 L2HGDHQ9H9P8 463 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 CLDND1Q9NY35 253 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 PCDHB4Q9Y5E5 795 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 PCDHA2Q9Y5H9 948 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 X6R8D5 127 aa6.22□□□□□ -1.41
UBR3-211ENST00000487689 KRIT1O00522 736 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 FZD7O75084 574 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 STAT5AP42229 794 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 ITGA1P56199 1179 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 USP51Q70EK9 711 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 FAM26EQ8N5C1 309 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 EPN3Q9H201 632 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 EPB41L1Q9H4G0 881 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 KIAA1522Q9P206 1035 aaPredicted RBP6.21□□□□□ -1.42
UBR3-211ENST00000487689 ZNF652Q9Y2D9 606 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 CCDC180Q9P1Z9 1646 aa6.21□□□□□ -1.42
UBR3-211ENST00000487689 DDX3XO00571 662 aaKnown RBP eCLIP6.2□□□□□ -1.42
UBR3-211ENST00000487689 SCG5P05408 212 aa6.2□□□□□ -1.42
UBR3-211ENST00000487689 KCTD13Q8WZ19 329 aa6.2□□□□□ -1.42
UBR3-211ENST00000487689 KISS1RQ969F8 398 aaPredicted RBP6.2□□□□□ -1.42
UBR3-211ENST00000487689 LGR4Q9BXB1 951 aa6.2□□□□□ -1.42
UBR3-211ENST00000487689 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 ARID5AQ03989 594 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 CDSNQ15517 529 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 TRIM48Q8IWZ4 208 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 TXNDC5Q8NBS9 432 aaKnown RBP6.19□□□□□ -1.42
UBR3-211ENST00000487689 PHOSPHO1Q8TCT1 267 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 TMEM209Q96SK2 561 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 ZNF747Q9BV97 191 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 JADE2Q9NQC1 790 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 DTLQ9NZJ0 730 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 FTSJ1Q9UET6 329 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 INVSQ9Y283 1065 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 TSC22D4Q9Y3Q8 395 aa6.19□□□□□ -1.42
UBR3-211ENST00000487689 B2RBV5 119 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 Q8N1Y9 231 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 RCBTB1Q8NDN9 531 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 SSBP3Q9BWW4 388 aaPredicted RBP6.18□□□□□ -1.42
UBR3-211ENST00000487689 PCED1AQ9H1Q7 454 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 VPS11Q9H270 941 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 MYOTQ9UBF9 498 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 CROTQ9UKG9 612 aa6.18□□□□□ -1.42
UBR3-211ENST00000487689 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 TBX1O43435 398 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 GFRA1P56159 465 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 LIMS2Q7Z4I7 341 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 NLRP10Q86W26 655 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 CCDC103Q8IW40 242 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 TMEM145Q8NBT3 493 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 SMOC1Q9H4F8 434 aa6.17□□□□□ -1.42
UBR3-211ENST00000487689 TMEFF2Q9UIK5 374 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms