RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 Q9Y3F1 56 aa22.31■■□□□ 1.16
SEC22A-208ENST00000487572 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.31■■□□□ 1.16
SEC22A-208ENST00000487572 CCDC194A0A1B0GVG4 234 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 CTAGE5O15320 804 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 UBA1P22314 1058 aaKnown RBP22.3■■□□□ 1.16
SEC22A-208ENST00000487572 ICAM3P32942 547 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 SP2Q02086 613 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 SEMA3FQ13275 785 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 NR5A1Q13285 461 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 MTMR1Q13613 665 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 NONOQ15233 471 aaKnown RBP eCLIP22.3■■□□□ 1.16
SEC22A-208ENST00000487572 KCNA10Q16322 511 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 HSCBQ8IWL3 235 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 KLHDC9Q8NEP7 349 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 TBCKQ8TEA7 893 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 CRYGNQ8WXF5 182 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 SNX21Q969T3 373 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 FERMT2Q96AC1 680 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 GPRASP2Q96D09 838 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 SENP6Q9GZR1 1112 aaPredicted RBP22.3■■□□□ 1.16
SEC22A-208ENST00000487572 JADE2Q9NQC1 790 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 KIF3AQ9Y496 699 aa22.3■■□□□ 1.16
SEC22A-208ENST00000487572 GGPS1O95749 300 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 CYP3A4P08684 503 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 TGFB3P10600 412 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 CST5P28325 142 aaPredicted RBP22.29■■□□□ 1.16
SEC22A-208ENST00000487572 ARHGAP1Q07960 439 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 CUL4AQ13619 759 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 SAFBQ15424 915 aaKnown RBP eCLIP22.29■■□□□ 1.16
SEC22A-208ENST00000487572 CEP55Q53EZ4 464 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 PIK3AP1Q6ZUJ8 805 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 UBE2Q1Q7Z7E8 422 aa22.29■■□□□ 1.16
SEC22A-208ENST00000487572 DHX37Q8IY37 1157 aaKnown RBP22.29■■□□□ 1.16
SEC22A-208ENST00000487572 DIS3L2Q8IYB7 885 aaKnown RBP22.29■■□□□ 1.16
SEC22A-208ENST00000487572 BTBD18B2RXH4 712 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 CPT1AP50416 773 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 INF2Q27J81 1249 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 PCSK9Q8NBP7 692 aaKnown RBP22.28■■□□□ 1.16
SEC22A-208ENST00000487572 AFG1LQ8WV93 481 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 CDHR1Q96JP9 859 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 BCAS3Q9H6U6 928 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 FOXD4L1Q9NU39 408 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 PHF24Q9UPV7 400 aa22.28■■□□□ 1.16
SEC22A-208ENST00000487572 FAM205CA6NFA0 338 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 FAM86B1E9PN63 330 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 ZEB2O60315 1214 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 ASGR1P07306 291 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 MYL3P08590 195 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 FAM86B2P0C5J1 330 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 ACLYP53396 1101 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 CELF3Q5SZQ8 465 aaKnown RBP22.27■■□□□ 1.16
SEC22A-208ENST00000487572 CCSAPQ6IQ19 270 aaPredicted RBP22.27■■□□□ 1.16
SEC22A-208ENST00000487572 PLA2G4DQ86XP0 818 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 FBXO18Q8NFZ0 1043 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 UIMC1Q96RL1 719 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 TSEN34Q9BSV6 310 aaKnown RBP22.27■■□□□ 1.16
SEC22A-208ENST00000487572 MLXIPQ9HAP2 919 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 KCNH7Q9NS40 1196 aa22.27■■□□□ 1.16
SEC22A-208ENST00000487572 ATP9AO75110 1047 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 ARP10275 920 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 COL6A1P12109 1028 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 RGS19P49795 217 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 NKX3-2P78367 333 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 LAMC2Q13753 1193 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 NEDD9Q14511 834 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 PRR16Q569H4 304 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 BRDTQ58F21 947 aaPredicted RBP22.26■■□□□ 1.15
SEC22A-208ENST00000487572 EARS2Q5JPH6 523 aaKnown RBP22.26■■□□□ 1.15
SEC22A-208ENST00000487572 MYSM1Q5VVJ2 828 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 CYFIP1Q7L576 1253 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 SPATA33Q96N06 139 aa22.26■■□□□ 1.15
SEC22A-208ENST00000487572 IGLV3-22A0A075B6J6 115 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 A0A1W2PQ45 241 aaPredicted RBP22.25■■□□□ 1.15
SEC22A-208ENST00000487572 A0A1W2PQY0 241 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 MOXD2PA6NHM9 499 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 MEIS1O00470 390 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 USP11P51784 963 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 ATN1P54259 1190 aaPredicted RBP22.25■■□□□ 1.15
SEC22A-208ENST00000487572 SP4Q02446 784 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 GNL2Q13823 731 aaKnown RBP22.25■■□□□ 1.15
SEC22A-208ENST00000487572 CXCL17Q6UXB2 119 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 TNFRSF25Q93038 417 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 VTI1AQ96AJ9 217 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 MYH7BA7E2Y1 1941 aa22.25■■□□□ 1.15
SEC22A-208ENST00000487572 A6NJR5 290 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 MAFGO15525 162 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 EDIL3O43854 480 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 TDP2O95551 362 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 MMP3P08254 477 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 KCNA2P16389 499 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 CIITAP33076 1130 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 LETM2Q2VYF4 491 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 NIPA1Q7RTP0 329 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 EMID1Q96A84 441 aaPredicted RBP22.24■■□□□ 1.15
SEC22A-208ENST00000487572 SENP7Q9BQF6 1050 aa22.24■■□□□ 1.15
SEC22A-208ENST00000487572 AGO4Q9HCK5 861 aaKnown RBP22.24■■□□□ 1.15
SEC22A-208ENST00000487572 H3BQV1 296 aa22.23■■□□□ 1.15
SEC22A-208ENST00000487572 NOP56O00567 594 aaKnown RBP22.23■■□□□ 1.15
SEC22A-208ENST00000487572 SETQ01105 290 aaPredicted RBP22.23■■□□□ 1.15
SEC22A-208ENST00000487572 HSDL1Q3SXM5 330 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms