RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PSMA5P28066 241 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 CDC27P30260 824 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 CCL23P55773 120 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
SPEN-205ENST00000487496 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 BRF1Q92994 677 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 IL23AQ9NPF7 189 aa13.17□□□□□ -0.3
SPEN-205ENST00000487496 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
SPEN-205ENST00000487496 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
SPEN-205ENST00000487496 FIBPO43427 364 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
SPEN-205ENST00000487496 SEMA3FQ13275 785 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 UBE2SQ16763 222 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 FAM109BQ6ICB4 259 aaPredicted RBP13.16□□□□□ -0.3
SPEN-205ENST00000487496 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
SPEN-205ENST00000487496 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
SPEN-205ENST00000487496 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 HAS3O00219 553 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 F2P00734 622 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
SPEN-205ENST00000487496 ZNF286BP0CG31 522 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 PSEN2P49810 448 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPEN-205ENST00000487496 NAPAP54920 295 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 NEDD9Q14511 834 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 PTGISQ16647 500 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 C7orf31Q8N865 590 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 SCLYQ96I15 445 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 NOD1Q9Y239 953 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
SPEN-205ENST00000487496 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.14□□□□□ -0.31
SPEN-205ENST00000487496 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.14□□□□□ -0.31
SPEN-205ENST00000487496 hCG_1984214I3L0E3 225 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 STXBP3O00186 592 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 FGBP02675 491 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 MFSD10Q14728 455 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
SPEN-205ENST00000487496 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 METTL7BQ6UX53 244 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 CYFIP1Q7L576 1253 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
SPEN-205ENST00000487496 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
SPEN-205ENST00000487496 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
SPEN-205ENST00000487496 NID2Q14112 1375 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
SPEN-205ENST00000487496 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 ITGB5P18084 799 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 EVCP57679 992 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 ZNF697Q5TEC3 545 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 OTOP2Q7RTS6 562 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
SPEN-205ENST00000487496 MYH7BA7E2Y1 1941 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 H3BRB1 525 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 ATP9AO75110 1047 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 LGALS2P05162 132 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 PDIA3P30101 505 aaKnown RBP13.12□□□□□ -0.31
SPEN-205ENST00000487496 ADCY7P51828 1080 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 BFSP2Q13515 415 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 NTRK3Q16288 839 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
SPEN-205ENST00000487496 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms