RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PDE1AP54750 535 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 GHRHRQ02643 423 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 PTCRAQ6ISU1 281 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-228ENST00000487354 FBXO22Q8NEZ5 403 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 KATNAL1Q9BW62 490 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 CCDC171Q6TFL3 1326 aa17.97■□□□□ 0.47
MCF2L-228ENST00000487354 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
MCF2L-228ENST00000487354 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 ALYREFQ86V81 257 aaKnown RBP17.96■□□□□ 0.47
MCF2L-228ENST00000487354 SERINC5Q86VE9 423 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 DBF4BQ8NFT6 615 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 MRPL38Q96DV4 380 aaKnown RBP17.96■□□□□ 0.47
MCF2L-228ENST00000487354 INSL6Q9Y581 213 aa17.96■□□□□ 0.47
MCF2L-228ENST00000487354 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
MCF2L-228ENST00000487354 NR3C2P08235 984 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 HSD17B4P51659 736 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 LAMC2Q13753 1193 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 HSDL1Q3SXM5 330 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 EPC2Q52LR7 807 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 PLEKHG4Q58EX7 1191 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 PNMA1Q8ND90 353 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 ANKS1AQ92625 1134 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 C16orf70Q9BSU1 422 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 JMJD4Q9H9V9 463 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
MCF2L-228ENST00000487354 H3BQ06 376 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-228ENST00000487354 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-228ENST00000487354 SP2Q02086 613 aa17.94■□□□□ 0.46
MCF2L-228ENST00000487354 ARHGEF16Q5VV41 709 aa17.94■□□□□ 0.46
MCF2L-228ENST00000487354 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
MCF2L-228ENST00000487354 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
MCF2L-228ENST00000487354 GPKOWQ92917 476 aaPredicted RBP eCLIP17.94■□□□□ 0.46
MCF2L-228ENST00000487354 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
MCF2L-228ENST00000487354 EMSYQ7Z589 1322 aa17.94■□□□□ 0.46
MCF2L-228ENST00000487354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-228ENST00000487354 POTEB3A0JP26 581 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 SORBS3O60504 671 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 SSTR3P32745 418 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-228ENST00000487354 ZP2Q05996 745 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 CELF3Q5SZQ8 465 aaKnown RBP17.93■□□□□ 0.46
MCF2L-228ENST00000487354 POTEBQ6S5H4 581 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 ENAHQ8N8S7 591 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-228ENST00000487354 ESR2Q92731 530 aa17.93■□□□□ 0.46
MCF2L-228ENST00000487354 BAZ2BQ9UIF8 2168 aaKnown RBP17.93■□□□□ 0.46
MCF2L-228ENST00000487354 TECTAO75443 2155 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 C19orf67A6NJJ6 358 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 RSPH10B2B2RC85 870 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 H3BNC9 293 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 KDM4AO75164 1064 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 AMHP03971 560 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 RSPH10BP0C881 870 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
MCF2L-228ENST00000487354 THPOP40225 353 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 SLC35G1Q2M3R5 365 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 TIGD5Q53EQ6 642 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 ASPRV1Q53RT3 343 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 TCEAL5Q5H9L2 206 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 FBXO11Q86XK2 927 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
MCF2L-228ENST00000487354 PABPC5Q96DU9 382 aaKnown RBP17.92■□□□□ 0.46
MCF2L-228ENST00000487354 MTMR8Q96EF0 704 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
MCF2L-228ENST00000487354 MRPL11Q9Y3B7 192 aaKnown RBP17.92■□□□□ 0.46
MCF2L-228ENST00000487354 PPFIA4O75335 1185 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 GGPS1O95749 300 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 CFBP00751 764 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 LTBRP36941 435 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 ANKRD45Q5TZF3 282 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 STOX1Q6ZVD7 989 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 BANK1Q8NDB2 785 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 TOP1MTQ969P6 601 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
MCF2L-228ENST00000487354 RNF41Q9H4P4 317 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-228ENST00000487354 TREHO43280 583 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 DCXO43602 365 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 ALADP13716 330 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 NHLH1Q02575 133 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 PGM5Q15124 567 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 PUS10Q3MIT2 529 aaKnown RBP17.9■□□□□ 0.46
MCF2L-228ENST00000487354 VSIG10LQ86VR7 867 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-228ENST00000487354 SAMD11Q96NU1 681 aa17.9■□□□□ 0.46
MCF2L-228ENST00000487354 ZSCAN10Q96SZ4 725 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-228ENST00000487354 KAT6AQ92794 2004 aa17.89■□□□□ 0.46
MCF2L-228ENST00000487354 B4E1Z4 1266 aa17.89■□□□□ 0.45
MCF2L-228ENST00000487354 SMIM10L2AP0DMW4 78 aa17.89■□□□□ 0.45
MCF2L-228ENST00000487354 SMIM10L2BP0DMW5 78 aa17.89■□□□□ 0.45
MCF2L-228ENST00000487354 MRE11P49959 708 aa17.89■□□□□ 0.45
MCF2L-228ENST00000487354 GPM6BQ13491 265 aa17.89■□□□□ 0.45
MCF2L-228ENST00000487354 PTPROQ16827 1216 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms