RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 STMN4Q9H169 189 aaPredicted RBP6.84□□□□□ -1.32
VPS13D-209ENST00000487188 ISCUQ9H1K1 167 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 PNMA2Q9UL42 364 aa6.84□□□□□ -1.32
VPS13D-209ENST00000487188 MED1Q15648 1581 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 AHCYL1O43865 530 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FLOT1O75955 427 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 CIAO1O76071 339 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 SUN1O94901 812 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 MYBL1P10243 752 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 CHN1P15882 459 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FERP16591 822 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 DRD4P21917 467 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PAPOLAP51003 745 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ATP2C1P98194 919 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 TCIRG1Q13488 830 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 SNX1Q13596 522 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 KIAA0753Q2KHM9 967 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 IFIT1BQ5T764 474 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 MIS18BP1Q6P0N0 1132 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 IFNL3Q8IZI9 196 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 KIF2BQ8N4N8 673 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 C1orf131Q8NDD1 294 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ZNF507Q8TCN5 953 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ESR2Q92731 530 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 CDK5RAP3Q96JB5 506 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PPP1R12CQ9BZL4 782 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FAM129AQ9BZQ8 928 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 VCXQ9H320 206 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 EBF2Q9HAK2 575 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 TCP11L1Q9NUJ3 509 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PHLPP1O60346 1717 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PGRMC1O00264 195 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FOXP2O15409 715 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 LONP1P36776 959 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PPP1R2P41236 205 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 POLE2P56282 527 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 CDK17Q00537 523 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 CCDC6Q16204 474 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 KLHDC7AQ5VTJ3 777 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 INTS8Q75QN2 995 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 DAAM2Q86T65 1068 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PROSER2Q86WR7 435 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 MAGEB6Q8N7X4 407 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PAPOLBQ9NRJ5 636 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ABCC12Q96J65 1359 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 A0A1W2PQJ5 194 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ZNF263O14978 683 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 SMNDC1O75940 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ALDH5A1P51649 535 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 RPS6KA3P51812 740 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 EIF3BP55884 814 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ERVK-9P63128 1117 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FOXO4P98177 505 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 AMPD3Q01432 767 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 ITIH4Q14624 930 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 TRADDQ15628 312 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 LRRC23Q53EV4 343 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 LDHAL6AQ6ZMR3 332 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 TTLL7Q6ZT98 887 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 LRRC34Q8IZ02 419 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 STAG2Q8N3U4 1231 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PROCA1Q8NCQ7 364 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 UHMK1Q8TAS1 419 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PIK3R5Q8WYR1 880 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 PRCCQ92733 491 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 RAB3IPQ96QF0 476 aaPredicted RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 DDX47Q9H0S4 455 aaKnown RBP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 DISC1Q9NRI5 854 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS13D-209ENST00000487188 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
VPS13D-209ENST00000487188 SOS2Q07890 1332 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 C5orf60A6NFR6 353 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 CCDC169A6NNP5 214 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 DAPK3O43293 454 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 LAMB3Q13751 1172 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 IRF2BP1Q8IU81 584 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 MFN1Q8IWA4 741 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 USP38Q8NB14 1042 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 TEKT4Q8WW24 435 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 NDST4Q9H3R1 872 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 FAM114A2Q9NRY5 505 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 PANK4Q9NVE7 773 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 BSDC1Q9NW68 430 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 CNOT8Q9UFF9 292 aaKnown RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 PLAGL2Q9UPG8 496 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 UBOX5O94941 541 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ARID4AP29374 1257 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-209ENST00000487188 CABP4P57796 275 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 KLHL30Q0D2K2 578 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 RIPK1Q13546 671 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 MAN2A1Q16706 1144 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 MUM1Q2TAK8 710 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 VWA3BQ502W6 1294 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ANKRD20A2Q5SQ80 823 aa6.82□□□□□ -1.32
VPS13D-209ENST00000487188 ANKRD20A1Q5TYW2 823 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms