RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 C2orf69Q8N8R5 385 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 PDZD8Q8NEN9 1154 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 NUP43Q8NFH3 380 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 KLHL42Q9P2K6 505 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 ANGEL1Q9UNK9 670 aaKnown RBP6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 TAF6LQ9Y6J9 622 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 KIAA1324LA8MWY0 1029 aaPredicted RBP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 NKRFO15226 690 aaKnown RBP eCLIP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 GPR39O43194 453 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 NRDCO43847 1150 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 ZEB2O60315 1214 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 EFEMP2O95967 443 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 PRKCAP17252 672 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 KRT15P19012 456 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 TACR1P25103 407 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 ADCYAP1R1P41586 468 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 JAM2P57087 298 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 CORO7P57737 925 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 IL2P60568 153 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 OXR1Q8N573 874 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 SMC1BQ8NDV3 1235 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 PANK1Q8TE04 598 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 EPB41L1Q9H4G0 881 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 PDLIM7Q9NR12 457 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 THG1LQ9NWX6 298 aaKnown RBP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 SLC5A4Q9NY91 659 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 ACSL6Q9UKU0 697 aa6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 COA3Q9Y2R0 106 aaPredicted RBP6.82□□□□□ -1.32
PRPF38A-203ENST00000487160 TCRBV5S4A2TA0A5A2 114 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 FITM1A5D6W6 292 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 PSPNO60542 156 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 KATNA1O75449 491 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 DGKIO75912 1065 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 FKBP9O95302 570 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 AMY2AP04746 511 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 AMY2BP19961 511 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 EXOSC10Q01780 885 aaKnown RBP6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 SPIRE1Q08AE8 756 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 GPR19Q15760 415 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 ARHGAP36Q6ZRI8 547 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 FKBP9P1Q75LS8 142 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 OTOP3Q7RTS5 596 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 CHTF18Q8WVB6 975 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 CCDC120Q96HB5 630 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 C19orf44Q9H6X5 657 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 SP110Q9HB58 689 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 SMURF1Q9HCE7 757 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 C19orf73Q9NVV2 129 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
PRPF38A-203ENST00000487160 KCNK3O14649 394 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 ADAMTS4O75173 837 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 KRT37O76014 449 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 S100BP04271 92 aaPredicted RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 NTRK1P04629 796 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 TRHRP34981 398 aaPredicted RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 GDNFP39905 211 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 TMPRSS15P98073 1019 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 PLCL1Q15111 1095 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 NR0B2Q15466 257 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 ARHGAP44Q17R89 818 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 TIGD5Q53EQ6 642 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 HABP4Q5JVS0 413 aaKnown RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 MROH9Q5TGP6 573 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 OTOP1Q7RTM1 612 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 SPATS2Q86XZ4 545 aaKnown RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 TP53INP2Q8IXH6 220 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 PIP4K2CQ8TBX8 421 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 SPTLC3Q9NUV7 552 aa6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 G3BP2Q9UN86 482 aaKnown RBP6.8□□□□□ -1.32
PRPF38A-203ENST00000487160 A0A1W2PQJ5 194 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 WNT11O96014 354 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 HPXP02790 462 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 YBX3P16989 372 aaKnown RBP eCLIP6.79□□□□□ -1.329e-7■□□□□ 9
PRPF38A-203ENST00000487160 GALK1P51570 392 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 RBM10P98175 930 aaKnown RBP6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 CYP4F8P98187 520 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 NECAB2Q7Z6G3 386 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 PTRH1Q86Y79 214 aaKnown RBP6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 SH3RF2Q8TEC5 729 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 COG1Q8WTW3 980 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 SLC6A20Q9NP91 592 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 MBNL3Q9NUK0 354 aaKnown RBP6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 APOBEC2Q9Y235 224 aaKnown RBP6.79□□□□□ -1.32
PRPF38A-203ENST00000487160 SLC12A8A0AV02 714 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 MARCH6O60337 910 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 ZBTB48P10074 688 aaPredicted RBP6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 LSSP48449 732 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 KPNA1P52294 538 aaPredicted RBP6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 ATP13A4Q4VNC1 1196 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 CREB3L3Q68CJ9 461 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms