RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 KCTD1Q719H9 257 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 CCDC144CPQ8IYA2 1237 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 MSL3Q8N5Y2 521 aaKnown RBP7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 CHST13Q8NET6 341 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 DCAF4Q8WV16 495 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 RUFY2Q8WXA3 655 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 CHMP4CQ96CF2 233 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 TTC14Q96N46 770 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 CTAGE1Q96RT6 745 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 IL25Q9H293 177 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 ABHD16BQ9H3Z7 469 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 SPC25Q9HBM1 224 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 CLDND1Q9NY35 253 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 FBXO40Q9UH90 709 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 MTMR7Q9Y216 660 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 MYO10Q9HD67 2058 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 USP24Q9UPU5 2620 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 FRYQ5TBA9 3013 aa7.54□□□□□ -1.2
CTDSPL-208ENST00000486978 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 ACACBO00763 2458 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 LINC01565O15544 149 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 GJB5O95377 273 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 ACTN1P12814 892 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 NBL1P41271 181 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 TKFCQ3LXA3 575 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 TAPT1Q6NXT6 567 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 BTNL9Q6UXG8 535 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 RASGRP2Q7LDG7 609 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 FRMD5Q7Z6J6 570 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 ZNF467Q7Z7K2 595 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 TLK2Q86UE8 772 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 IQCA1Q86XH1 822 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 ADSSL1Q8N142 457 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 BANK1Q8NDB2 785 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 FBXO22Q8NEZ5 403 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 DDX11Q96FC9 970 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 RAD9AQ99638 391 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 PRRX2Q99811 253 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 UPF3BQ9BZI7 483 aaKnown RBP7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 CHD8Q9HCK8 2581 aa7.53□□□□□ -1.2
CTDSPL-208ENST00000486978 EP300Q09472 2414 aaPredicted RBP7.52□□□□□ -1.2
CTDSPL-208ENST00000486978 B4E1Z4 1266 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 STXBP3O00186 592 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 NBNO60934 754 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 KDM4AO75164 1064 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 TBX10O75333 385 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 CABYRO75952 493 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 SNHG28P0DPA3 235 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 PDHBP11177 359 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 ZNF543Q08ER8 600 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 EPC2Q52LR7 807 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 SYDE2Q5VT97 1194 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 CENPQQ7L2Z9 268 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 DGKHQ86XP1 1220 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 ANKRD35Q8N283 1001 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 PURBQ96QR8 312 aaKnown RBP7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 KRT23Q9C075 422 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 ACAD9Q9H845 621 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 HOMER2Q9NSB8 354 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 RNF146Q9NTX7 359 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 PRR12Q9ULL5 1215 aa7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL-208ENST00000486978 LOC730098B7Z3J9 87 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 SGSM2O43147 1006 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 LGR5O75473 907 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 ICAM1P05362 532 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 ALAS1P13196 640 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 RFC2P35250 354 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 SLC16A2P36021 539 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 KCNJ6P48051 423 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 SNAP25P60880 206 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 PURAQ00577 322 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 PTH1RQ03431 593 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 HYAL1Q12794 435 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 COL9A2Q14055 689 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 TTBK2Q6IQ55 1244 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 EEPD1Q7L9B9 569 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 PNMA1Q8ND90 353 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 ZSCAN10Q96SZ4 725 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 OSBPL7Q9BZF2 842 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 RANBP17Q9H2T7 1088 aaKnown RBP7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 KAT14Q9H8E8 782 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 GPCPD1Q9NPB8 672 aa7.51□□□□□ -1.21
CTDSPL-208ENST00000486978 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms