RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SPATA5Q8NB90 893 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 ZSWIM2Q8NEG5 633 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 NKX2-3Q8TAU0 364 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 IPCEF1Q8WWN9 437 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 CCT6BQ92526 530 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 CNKSR1Q969H4 720 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 NUDT16L1Q9BRJ7 211 aaKnown RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 PRKRIP1Q9H875 184 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 TBC1D22BQ9NU19 505 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 BLOC1S4Q9NUP1 217 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 TMOD3Q9NYL9 352 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 FAM186AA6NE01 2351 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 ASTN2O75129 1339 aaPredicted RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 SOS1Q07889 1333 aaPredicted RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 ST20-MTHFSA0A0A6YYL1 179 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 CYSRT1A8MQ03 144 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 DDX3YO15523 660 aaKnown RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 ABLIM3O94929 683 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 INMTO95050 263 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 FBLN1P23142 703 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 PLXNA3P51805 1871 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 GUCA2AQ02747 115 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 PSMD6Q15008 389 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 SEPT7Q16181 437 aaKnown RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 SPATA1Q5VX52 437 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 TYW1BQ6NUM6 668 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 RASGRP2Q7LDG7 609 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 GALNT5Q7Z7M9 940 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 SRLQ86TD4 932 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 ANKS1AQ92625 1134 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 TMEM51Q9NW97 253 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 ARGLU1Q9NWB6 273 aaPredicted RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
SF1-217ENST00000486960 PFDN2Q9UHV9 154 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 PA2G4Q9UQ80 394 aaKnown RBP6.29□□□□□ -1.4
SF1-217ENST00000486960 TMX2Q9Y320 296 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 PCDHGB3Q9Y5G1 929 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 ZZEF1O43149 2961 aa6.29□□□□□ -1.4
SF1-217ENST00000486960 FRYLO94915 3013 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 COL3A1P02461 1466 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 LTBP2Q14767 1821 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 IGF2BP3O00425 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF1-217ENST00000486960 PER1O15534 1290 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 CAPN3P20807 821 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 RPS6KB1P23443 525 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 HPDP32754 393 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 ATP6V1E1P36543 226 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 UBASH3AP57075 661 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 UBXN2AP68543 259 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 CXCL9Q07325 125 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 PPP2R5CQ13362 524 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 PWP1Q13610 501 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 GBX1Q14549 363 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 VPS53Q5VIR6 699 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 RNF219Q5W0B1 726 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 C16orf46Q6P387 395 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 LDHAL6AQ6ZMR3 332 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 C7orf61Q8IZ16 206 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 CCAR2Q8N163 923 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 LSMEM1Q8N8F7 131 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 OR8H1Q8NGG4 311 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 RNF217Q8TC41 542 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 PARD3BQ8TEW8 1205 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 PTCD2Q8WV60 388 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ZBTB10Q96DT7 871 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 TESK2Q96S53 571 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 MYD88Q99836 296 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 UBE2OQ9C0C9 1292 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 CCDC8Q9H0W5 538 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ATP6V0A4Q9HBG4 840 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 CYP4F11Q9HBI6 524 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ZCCHC17Q9NP64 241 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 ALG13Q9NP73 1137 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 NKIRAS2Q9NYR9 191 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 CPSF2Q9P2I0 782 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 RABL2AQ9UBK7 228 aaPredicted RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 SUN2Q9UH99 717 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 ADAMTS1Q9UHI8 967 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 NARFQ9UHQ1 456 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 FKBPLQ9UIM3 349 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 SPEGQ15772 3267 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 NPC1L1Q9UHC9 1359 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 LRRC37A2A6NM11 1700 aa6.28□□□□□ -1.4
SF1-217ENST00000486960 DDX60LQ5H9U9 1706 aaKnown RBP6.28□□□□□ -1.4
SF1-217ENST00000486960 CGNL1Q0VF96 1302 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 A0A1B0GVC2 190 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms