RNA–Protein interactions for RNA: ENST00000486825.6

TRIT1-209, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-209ENST00000486825 LRCH3Q96II8 777 aa17.89■□□□□ 0.45
TRIT1-209ENST00000486825 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
TRIT1-209ENST00000486825 INPP4AQ96PE3 977 aaPredicted RBP17.89■□□□□ 0.45
TRIT1-209ENST00000486825 TM6SF1Q9BZW5 370 aa17.89■□□□□ 0.45
TRIT1-209ENST00000486825 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
TRIT1-209ENST00000486825 hCG_1642624A0A1W2PR95 340 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 SPATA31C2B4DYI2 1134 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 NOP56O00567 594 aaKnown RBP17.88■□□□□ 0.45
TRIT1-209ENST00000486825 SOX1O00570 391 aaPredicted RBP17.88■□□□□ 0.45
TRIT1-209ENST00000486825 MRPS9P82933 396 aaKnown RBP17.88■□□□□ 0.45
TRIT1-209ENST00000486825 BFSP2Q13515 415 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
TRIT1-209ENST00000486825 C7orf31Q8N865 590 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 IL31RAQ8NI17 732 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 SENP7Q9BQF6 1050 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 AGXT2Q9BYV1 514 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 ZSWIM6Q9HCJ5 1215 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 IL23AQ9NPF7 189 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 RIC8AQ9NPQ8 531 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 DNAH12Q6ZR08 3092 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
TRIT1-209ENST00000486825 SMCO2A6NFE2 343 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 FGBP02675 491 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 CPA1P15085 419 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 CYP2C18P33260 490 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 ADD1P35611 737 aaKnown RBP17.87■□□□□ 0.45
TRIT1-209ENST00000486825 ADCY7P51828 1080 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 C9orf50Q5SZB4 431 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 FAM109BQ6ICB4 259 aaPredicted RBP17.87■□□□□ 0.45
TRIT1-209ENST00000486825 SESTD1Q86VW0 696 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 GPKOWQ92917 476 aaPredicted RBP eCLIP17.87■□□□□ 0.45
TRIT1-209ENST00000486825 GPRASP2Q96D09 838 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 NOC4LQ9BVI4 516 aaKnown RBP17.87■□□□□ 0.45
TRIT1-209ENST00000486825 TRMT13Q9NUP7 481 aaKnown RBP17.87■□□□□ 0.45
TRIT1-209ENST00000486825 BARHL2Q9NY43 387 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 SCN10AQ9Y5Y9 1956 aa17.87■□□□□ 0.45
TRIT1-209ENST00000486825 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 PRPF3O43395 683 aaKnown RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 PFKMP08237 780 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 CSF2RAP15509 400 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 UBA1P22314 1058 aaKnown RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 CDC27P30260 824 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 PSEN2P49810 448 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 SMAD3P84022 425 aaKnown RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 FUT2Q10981 343 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 PTGISQ16647 500 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 WWC2Q6AWC2 1192 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 CPLX2Q6PUV4 134 aaKnown RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 METTL7BQ6UX53 244 aa17.86■□□□□ 0.45
TRIT1-209ENST00000486825 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
TRIT1-209ENST00000486825 PARNO95453 639 aaKnown RBP17.85■□□□□ 0.45
TRIT1-209ENST00000486825 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
TRIT1-209ENST00000486825 SCG2P13521 617 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 GNA11P29992 359 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 RFC2P35250 354 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 EVCP57679 992 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 SP2Q02086 613 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 AP3B2Q13367 1082 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 MFSD10Q14728 455 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 PFKFB3Q16875 520 aaPredicted RBP17.85■□□□□ 0.45
TRIT1-209ENST00000486825 KIAA0753Q2KHM9 967 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 HSDL1Q3SXM5 330 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 CAGE1Q8TC20 777 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 ZFP91Q96JP5 570 aaPredicted RBP17.85■□□□□ 0.45
TRIT1-209ENST00000486825 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
TRIT1-209ENST00000486825 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 F2P00734 622 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 CYP2C9P11712 490 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 CCL23P55773 120 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 UBE2SQ16763 222 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 ZNF365Q70YC5 407 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 CYFIP1Q7L576 1253 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 TRIM22Q8IYM9 498 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 BICD2Q8TD16 824 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 KAT2BQ92831 832 aa17.84■□□□□ 0.45
TRIT1-209ENST00000486825 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
TRIT1-209ENST00000486825 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.84■□□□□ 0.451e-9■■□□□ 11.6
TRIT1-209ENST00000486825 ZNF215Q9UL58 517 aaPredicted RBP17.84■□□□□ 0.45
TRIT1-209ENST00000486825 H3BRB1 525 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 STXBP3O00186 592 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 CPLX1O14810 134 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 GNAT1P11488 350 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 ACTN1P12814 892 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 PDIA3P30101 505 aaKnown RBP17.83■□□□□ 0.44
TRIT1-209ENST00000486825 ZNF76P36508 570 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 EPHB4P54760 987 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 ANAPC15P60006 121 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 MTMR1Q13613 665 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.44
TRIT1-209ENST00000486825 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.44
TRIT1-209ENST00000486825 JADE2Q9NQC1 790 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
TRIT1-209ENST00000486825 HDAC6Q9UBN7 1215 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms