RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ME3Q16798 604 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 NLRX1Q86UT6 975 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 REXO1Q8N1G1 1221 aaKnown RBP20.83■□□□□ 0.93
COL1A1-207ENST00000486572 PGBD1Q96JS3 809 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 TOX2Q96NM4 488 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 KIF2CQ99661 725 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 MTG1Q9BT17 334 aaPredicted RBP20.83■□□□□ 0.93
COL1A1-207ENST00000486572 TMEM260Q9NX78 707 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 PRKAG2Q9UGJ0 569 aa20.83■□□□□ 0.93
COL1A1-207ENST00000486572 STK36Q9NRP7 1315 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 LARGE1O95461 756 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 CDK7P50613 346 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 SP2Q02086 613 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 SEMA3FQ13275 785 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 ITGA7Q13683 1181 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 CELF3Q5SZQ8 465 aaKnown RBP20.82■□□□□ 0.92
COL1A1-207ENST00000486572 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 MCTP2Q6DN12 878 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 PPTC7Q8NI37 304 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 BICD2Q8TD16 824 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 GPRASP2Q96D09 838 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 SEZ6LQ9BYH1 1024 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
COL1A1-207ENST00000486572 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
COL1A1-207ENST00000486572 DCDC2CA8MYV0 355 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 CLTBP09497 229 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 ITGB5P18084 799 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 SREBF1P36956 1147 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 PSMC6P62333 389 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 JAKMIP3Q5VZ66 844 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 SLC43A3Q8NBI5 491 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 CDHR1Q96JP9 859 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 UBIAD1Q9Y5Z9 338 aa20.81■□□□□ 0.92
COL1A1-207ENST00000486572 GRIN2DO15399 1336 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 SORBS3O60504 671 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 MTMR1Q13613 665 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 NEDD9Q14511 834 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 DGKDQ16760 1214 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 CHRDL2Q6WN34 429 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 FAM177A1Q8N128 213 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-207ENST00000486572 NECAB1Q8N987 351 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 SPATA33Q96N06 139 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
COL1A1-207ENST00000486572 ADAMTS3O15072 1205 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 NLRP5P59047 1200 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 HSDL1Q3SXM5 330 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 METTL7BQ6UX53 244 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 FAM126BQ8IXS8 530 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 AIFM3Q96NN9 605 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 SENP7Q9BQF6 1050 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 JADE2Q9NQC1 790 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 LIMCH1Q9UPQ0 1083 aa20.79■□□□□ 0.92
COL1A1-207ENST00000486572 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 TLR3O15455 904 aaKnown RBP20.78■□□□□ 0.92
COL1A1-207ENST00000486572 HOXD8P13378 290 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-207ENST00000486572 MAGEA10P43363 369 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-207ENST00000486572 ARHGAP4P98171 946 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 FAAP100Q0VG06 881 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 SH3RF1Q7Z6J0 888 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 GIMAP8Q8ND71 665 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-207ENST00000486572 MXRA8Q9BRK3 442 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 COLQQ9Y215 455 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-207ENST00000486572 LTBP2Q14767 1821 aa20.78■□□□□ 0.92
COL1A1-207ENST00000486572 TRIM43BA6NCK2 446 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 NOP56O00567 594 aaKnown RBP20.77■□□□□ 0.92
COL1A1-207ENST00000486572 MAFGO15525 162 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 RABEP1Q15276 862 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 CEP55Q53EZ4 464 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 CYFIP1Q7L576 1253 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 RASGRP4Q8TDF6 673 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 TRIM43Q96BQ3 446 aaPredicted RBP20.77■□□□□ 0.92
COL1A1-207ENST00000486572 GDF15Q99988 308 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 LBHD1Q9BQE6 289 aaPredicted RBP20.77■□□□□ 0.92
COL1A1-207ENST00000486572 BCAS3Q9H6U6 928 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 TMEM39AQ9NV64 488 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 PCDH10Q9P2E7 1040 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
COL1A1-207ENST00000486572 PCDHA4Q9UN74 947 aa20.77■□□□□ 0.92
COL1A1-207ENST00000486572 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 KIAA0355O15063 1070 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 PPFIA4O75335 1185 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 KCNA2P16389 499 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 XBP1P17861 261 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 NBPF20Q3BBV1 942 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 GALNT17Q6IS24 598 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 NFRKBQ6P4R8 1299 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 DAGLBQ8NCG7 672 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 NSUN7Q8NE18 718 aaKnown RBP20.76■□□□□ 0.91
COL1A1-207ENST00000486572 CRYGNQ8WXF5 182 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 WASF1Q92558 559 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 KATNAL1Q9BW62 490 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 PRO3102Q9H379 93 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 TBX21Q9UL17 535 aa20.76■□□□□ 0.91
COL1A1-207ENST00000486572 DTNBO60941 627 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 ATP9AO75110 1047 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 F2P00734 622 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 CD4P01730 458 aa20.75■□□□□ 0.91
COL1A1-207ENST00000486572 CYP3A4P08684 503 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms