RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GPC2Q8N158 579 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 SLC5A5Q92911 643 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 KIFC2Q96AC6 838 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 BAG1Q99933 345 aaPredicted RBP13.34□□□□□ -0.27
PKP4-213ENST00000486254 AS3MTQ9HBK9 375 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 MAGEC2Q9UBF1 373 aaPredicted RBP13.34□□□□□ -0.27
PKP4-213ENST00000486254 HACL1Q9UJ83 578 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 ZNF536O15090 1300 aa13.34□□□□□ -0.27
PKP4-213ENST00000486254 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 TEX33O43247 280 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 EGFRP00533 1210 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 TNNT1P13805 278 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 DNM2P50570 870 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 PRELPP51888 382 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
PKP4-213ENST00000486254 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
PKP4-213ENST00000486254 SCYL3Q8IZE3 742 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 NEK9Q8TD19 979 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
PKP4-213ENST00000486254 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 PHIPQ8WWQ0 1821 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 SBF1O95248 1867 aa13.33□□□□□ -0.28
PKP4-213ENST00000486254 MEIS1O00470 390 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 PSMD10O75832 226 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 PLA2G4BP0C869 781 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 OAZ1P54368 228 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 SLC12A3P55017 1021 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 RASSF7Q02833 373 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 ECM1Q16610 540 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 HSP90AA4PQ58FG1 418 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 FIGNQ5HY92 759 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 FAM26FQ5R3K3 315 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 RIT2Q99578 217 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 GLIS2Q9BZE0 524 aaPredicted RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 KCND2Q9NZV8 630 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 ZNF541Q9H0D2 1346 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 RLFQ13129 1914 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 POTECB2RU33 542 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 CFBP00751 764 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 GYPCP04921 128 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 SPATA31C1P0DKV0 1188 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 FCER1AP12319 257 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 CYP11B2P19099 503 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 LMNB1P20700 586 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 HOXA13P31271 388 aaPredicted RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 ZNF76P36508 570 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 SNAP25P60880 206 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 COASYQ13057 564 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 CEP135Q66GS9 1140 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 B3GNT9Q6UX72 402 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 ZC3H3Q8IXZ2 948 aaKnown RBP13.32□□□□□ -0.28
PKP4-213ENST00000486254 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 CCPG1Q9ULG6 757 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
PKP4-213ENST00000486254 MYPNQ86TC9 1320 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 LOC285556D6RIA3 1793 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 PAPPA2Q9BXP8 1791 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 C19orf81C9J6K1 198 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 MED24O75448 989 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 UQCRHP07919 91 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 VCAM1P19320 739 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 INPP5BP32019 993 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
PKP4-213ENST00000486254 ANKRD40Q6AI12 368 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 XRRA1Q6P2D8 792 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 CCDC174Q6PII3 467 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 MYOCDQ8IZQ8 938 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 MB21D1Q8N884 522 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 CEP63Q96MT8 703 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 TSG101Q99816 390 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 HSD17B14Q9BPX1 270 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 SEMA6BQ9H3T3 888 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 PANK4Q9NVE7 773 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms