RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 PCNX4Q63HM2 1172 aa25.29■■□□□ 1.64
HLA-F-228ENST00000486194 C7orf31Q8N865 590 aa25.29■■□□□ 1.64
HLA-F-228ENST00000486194 FAM161BQ96MY7 647 aa25.29■■□□□ 1.64
HLA-F-228ENST00000486194 SEMA6BQ9H3T3 888 aa25.29■■□□□ 1.64
HLA-F-228ENST00000486194 FIBPO43427 364 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 F2P00734 622 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 PSEN2P49810 448 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 MRPS9P82933 396 aaKnown RBP25.28■■□□□ 1.64
HLA-F-228ENST00000486194 NEDD9Q14511 834 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 TEX2Q8IWB9 1127 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 KCNB2Q92953 911 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 GUCD1Q96NT3 240 aa25.28■■□□□ 1.64
HLA-F-228ENST00000486194 DNAJB2P25686 324 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 HSPA4P34932 840 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 SP2Q02086 613 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 MFSD10Q14728 455 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 HSDL1Q3SXM5 330 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 HEATR3Q7Z4Q2 680 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 NLRX1Q86UT6 975 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 CAGE1Q8TC20 777 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 SCLYQ96I15 445 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 TCEANC2Q96MN5 208 aa25.27■■□□□ 1.64
HLA-F-228ENST00000486194 KLF18A0A0U1RQI7 1052 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 SPDYE3A6NKU9 549 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 SPATA31C2B4DYI2 1134 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 ZNF286BP0CG31 522 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 KIAA0753Q2KHM9 967 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 PPP1R13LQ8WUF5 828 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 ZFP91Q96JP5 570 aaPredicted RBP25.26■■□□□ 1.63
HLA-F-228ENST00000486194 ALG1Q9BT22 464 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 EHMT1Q9H9B1 1298 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 GTF2IRD1Q9UHL9 959 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 BRPF3Q9ULD4 1205 aa25.26■■□□□ 1.63
HLA-F-228ENST00000486194 hCG_1642624A0A1W2PR95 340 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 GOLGA8AA7E2F4 631 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 hCG_1984214I3L0E3 225 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 HAS3O00219 553 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 NOP56O00567 594 aaKnown RBP25.25■■□□□ 1.63
HLA-F-228ENST00000486194 ACTN1P12814 892 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 GDF6Q6KF10 455 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-228ENST00000486194 METTL7BQ6UX53 244 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 OTOP2Q7RTS6 562 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 ZNF713Q8N859 430 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-228ENST00000486194 GIMAP8Q8ND71 665 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-228ENST00000486194 CDHR1Q96JP9 859 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 RTEL1Q9NZ71 1219 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 CNTNAP5Q8WYK1 1306 aa25.25■■□□□ 1.63
HLA-F-228ENST00000486194 CCDC196A0A1B0GTZ2 297 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 EPB41L2O43491 1005 aaKnown RBP25.24■■□□□ 1.63
HLA-F-228ENST00000486194 IQCF3P0C7M6 154 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 PSMA5P28066 241 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 RAB30Q15771 203 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 PPP1R18Q6NYC8 613 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 BLOC1S2Q6QNY1 142 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 AFAP1L1Q8TED9 768 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 GPKOWQ92917 476 aaPredicted RBP eCLIP25.24■■□□□ 1.63
HLA-F-228ENST00000486194 TIFAQ96CG3 184 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 JAKMIP1Q96N16 626 aaKnown RBP25.24■■□□□ 1.63
HLA-F-228ENST00000486194 SENP7Q9BQF6 1050 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 TTYH1Q9H313 450 aaPredicted RBP25.24■■□□□ 1.63
HLA-F-228ENST00000486194 HDAC6Q9UBN7 1215 aa25.24■■□□□ 1.63
HLA-F-228ENST00000486194 SORBS3O60504 671 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 PARNO95453 639 aaKnown RBP25.23■■□□□ 1.63
HLA-F-228ENST00000486194 GPRASP2Q96D09 838 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 CDX2Q99626 313 aaPredicted RBP25.23■■□□□ 1.63
HLA-F-228ENST00000486194 USP26Q9BXU7 913 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 CXXC1Q9P0U4 656 aaPredicted RBP25.23■■□□□ 1.63
HLA-F-228ENST00000486194 MSRAQ9UJ68 235 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 NAP1L2Q9ULW6 460 aaPredicted RBP25.23■■□□□ 1.63
HLA-F-228ENST00000486194 SNX14Q9Y5W7 946 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 SLC4A7Q9Y6M7 1214 aa25.23■■□□□ 1.63
HLA-F-228ENST00000486194 NAPAP54920 295 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 CYFIP1Q7L576 1253 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 DEFB128Q7Z7B8 93 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 SLC17A8Q8NDX2 589 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 PBX4Q9BYU1 374 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 GLT8D2Q9H1C3 349 aa25.22■■□□□ 1.63
HLA-F-228ENST00000486194 ZBBXA8MT70 800 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 METAP2P50579 478 aaKnown RBP eCLIP25.21■■□□□ 1.63
HLA-F-228ENST00000486194 RBL2Q08999 1139 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 PTK7Q13308 1070 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 UBE2SQ16763 222 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 WWC2Q6AWC2 1192 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 C16orf70Q9BSU1 422 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 PCDHA6Q9UN73 950 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 PCDHA8Q9Y5H6 950 aa25.21■■□□□ 1.63
HLA-F-228ENST00000486194 V9GY48 417 aaPredicted RBP25.21■■□□□ 1.63
HLA-F-228ENST00000486194 H3BRB1 525 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 MAFGO15525 162 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 SELPP16109 830 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 FUT2Q10981 343 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 SEMA3FQ13275 785 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 ERICH6BQ5W0A0 696 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 Q6ZUG5 572 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 FBXL16Q8N461 479 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 CTAGE1Q96RT6 745 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 FTOQ9C0B1 505 aaKnown RBP eCLIP25.2■■□□□ 1.62
HLA-F-228ENST00000486194 ZNF576Q9H609 170 aa25.2■■□□□ 1.62
HLA-F-228ENST00000486194 TUT1Q9H6E5 874 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms