RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 POLR3EQ9NVU0 708 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 CHD7Q9P2D1 2997 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 CTNNA3Q9UI47 895 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 MYH7BA7E2Y1 1941 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 KIAA1217Q5T5P2 1943 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 CFBP00751 764 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 IQCF3P0C7M6 154 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 IGFBP4P22692 258 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 HOXA13P31271 388 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 CPT1AP50416 773 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 ZNF200P98182 395 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 IMMTQ16891 758 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 KRT40Q6A162 431 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 GDF6Q6KF10 455 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 IL31RAQ8NI17 732 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 DHX38Q92620 1227 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 WNT8BQ93098 351 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 RMDN3Q96TC7 470 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 MAD2L2Q9UI95 211 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
TMEM39A-208ENST00000486159 ABCB11O95342 1321 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 CYTH3O43739 400 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 RGS20O76081 388 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 MMP3P08254 477 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 CYP21A2P08686 494 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 CASTP20810 708 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 ASPRV1Q53RT3 343 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 IFIT1BQ5T764 474 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 PIBF1Q8WXW3 757 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 JAKMIP1Q96N16 626 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 PXMP2Q9NR77 195 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 MSRAQ9UJ68 235 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 DDX41Q9UJV9 622 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 BAZ2BQ9UIF8 2168 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-208ENST00000486159 MYO9BQ13459 2157 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 KLRF2D3W0D1 207 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 NKRFO15226 690 aaKnown RBP eCLIP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 NR3C2P08235 984 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 ZNF286BP0CG31 522 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 MYCLP12524 364 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 ATP2A2P16615 1042 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 TIE1P35590 1138 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 SP2Q02086 613 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 ARHGEF16Q5VV41 709 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 NFRKBQ6P4R8 1299 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 BLOC1S2Q6QNY1 142 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 NSUN6Q8TEA1 469 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 MTMR8Q96EF0 704 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 PIGSQ96S52 555 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 UBAC1Q9BSL1 405 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 ALG1Q9BT22 464 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 OSBPL7Q9BZF2 842 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 UPF3BQ9BZI7 483 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 KRT23Q9C075 422 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 SLC28A3Q9HAS3 691 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 HDAC6Q9UBN7 1215 aa10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 MRPL11Q9Y3B7 192 aaKnown RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-208ENST00000486159 LCHNA4D1U4 455 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 STK25O00506 426 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 GH1P01241 217 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 CA3P07451 260 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 MCM4P33991 863 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 HSD17B4P51659 736 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 ANTXR2P58335 489 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 RAB30Q15771 203 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 STXBP2Q15833 593 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 PTGISQ16647 500 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 RPUSD2Q8IZ73 545 aaKnown RBP10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 MYL10Q9BUA6 226 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 FTOQ9C0B1 505 aaKnown RBP eCLIP10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 TANC1Q9C0D5 1861 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 DOCK5Q9H7D0 1870 aa10.82□□□□□ -0.68
TMEM39A-208ENST00000486159 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms