RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 MAMDC4Q6UXC1 1216 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 CD99L2Q8TCZ2 262 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 HAS1Q92839 578 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 CDHR1Q96JP9 859 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 FAM20AQ96MK3 541 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 PCDHA7Q9UN72 937 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 SRPRBQ9Y5M8 271 aaKnown RBP20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 CUTAO60888 179 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 PRPF40AO75400 957 aaKnown RBP20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 DTHD1Q6ZMT9 781 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 WDR11Q9BZH6 1224 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 KCNH7Q9NS40 1196 aa20.05■□□□□ 0.8
SMARCD3-212ENST00000485610 MAFGO15525 162 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 RGS20O76081 388 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 GNRH1P01148 92 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 ARP10275 920 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 CYP2B6P20813 491 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 TMEM266Q2M3C6 531 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 AXDND1Q5T1B0 1012 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 ZNF296Q8WUU4 475 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 SLC5A5Q92911 643 aa20.04■□□□□ 0.8
SMARCD3-212ENST00000485610 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 GOLGA6L4A6NEF3 574 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 XRCC5P13010 732 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 PTMSP20962 102 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 HOXD10P28358 340 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 ICAM3P32942 547 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 TXKP42681 527 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 ARHGEF6Q15052 776 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 OLFML2BQ68BL8 750 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 ADALQ6DHV7 355 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 TINF2Q9BSI4 451 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 ZNF577Q9BSK1 485 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 AGO4Q9HCK5 861 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 VTA1Q9NP79 307 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.03■□□□□ 0.8
SMARCD3-212ENST00000485610 IPO5O00410 1097 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 FLT3LGP49771 235 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 FXR2P51116 673 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 UBE2HP62256 183 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 CAP1Q01518 475 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 PRKCZQ05513 592 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 SEMA3FQ13275 785 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 LRCH2Q5VUJ6 765 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 FBXO16Q8IX29 292 aaPredicted RBP20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 ZNF579Q8NAF0 562 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 RAB34Q9BZG1 259 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 TTC12Q9H892 705 aaPredicted RBP20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 TSKSQ9UJT2 592 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 GABRQQ9UN88 632 aa20.02■□□□□ 0.8
SMARCD3-212ENST00000485610 MYH9P35579 1960 aaKnown RBP20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 A0A1W2PQ27 194 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 A0A1W2PQ64 194 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 A0A1W2PQD8 194 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 GRIN1Q05586 938 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 IL17AQ16552 155 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 SEPT14Q6ZU15 432 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 EEPD1Q7L9B9 569 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 CLIC6Q96NY7 704 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 RIT2Q99578 217 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 CSRNP2Q9H175 543 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 SRRDQ9UH36 339 aa20.01■□□□□ 0.79
SMARCD3-212ENST00000485610 SPATA31C2B4DYI2 1134 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 GAS7O60861 476 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 GADD45BO75293 160 aaPredicted RBP20■□□□□ 0.79
SMARCD3-212ENST00000485610 KCNV1Q6PIU1 500 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 GJA10Q969M2 543 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 UIMC1Q96RL1 719 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 TEKT3Q9BXF9 490 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 FLRT1Q9NZU1 646 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 PKD2L1Q9P0L9 805 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 PCDHA12Q9UN75 941 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 LOXHD1Q8IVV2 1947 aa20■□□□□ 0.79
SMARCD3-212ENST00000485610 PSMD10O75832 226 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 SNAI1O95863 264 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 TECP42680 631 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 ITGB3BPQ13352 177 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 IRF5Q13568 498 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 CCL14Q16627 93 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 TRMT44Q8IYL2 757 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 IGSF22Q8N9C0 903 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 AK8Q96MA6 479 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 KATNBL1Q9H079 304 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 ABHD16BQ9H3Z7 469 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 TBC1D22BQ9NU19 505 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 VAV3Q9UKW4 847 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 NFASCO94856 1347 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 IGHA2P01877 340 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 TGFB3P10600 412 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 KCNA2P16389 499 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 PRMT2P55345 433 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 RESP18Q5W5W9 173 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 SCFD2Q8WU76 684 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 MRPS27Q92552 414 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 SDF4Q9BRK5 362 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 TCEAL9Q9UHQ7 104 aa19.99■□□□□ 0.79
SMARCD3-212ENST00000485610 POTEMA6NI47 508 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms