RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
HDAC6-227ENST00000485102 CHMP4BP1P59074 171 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-227ENST00000485102 SPRED2Q7Z698 418 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 DHX37Q8IY37 1157 aaKnown RBP15.16■□□□□ 0.02
HDAC6-227ENST00000485102 TGS1Q96RS0 853 aaKnown RBP15.16■□□□□ 0.02
HDAC6-227ENST00000485102 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 SUGCTQ9HAC7 445 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 RAPGEFL1Q9UHV5 662 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
HDAC6-227ENST00000485102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-227ENST00000485102 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 CFBP00751 764 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 HOXC8P31273 242 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 TRAF1Q13077 416 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 MBTPS1Q14703 1052 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 SEC23AQ15436 765 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
HDAC6-227ENST00000485102 TCTN1Q2MV58 587 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 CELF3Q5SZQ8 465 aaKnown RBP15.15■□□□□ 0.02
HDAC6-227ENST00000485102 ZNF618Q5T7W0 954 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
HDAC6-227ENST00000485102 SERINC5Q86VE9 423 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 VAT1LQ9HCJ6 419 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
HDAC6-227ENST00000485102 PIEZO1Q92508 2521 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 PALM3A6NDB9 673 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-227ENST00000485102 KLRF2D3W0D1 207 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 ZBTB5O15062 677 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 LGR5O75473 907 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 HTRA4P83105 476 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-227ENST00000485102 NUCB1Q02818 461 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 HSDL1Q3SXM5 330 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 STAG2Q8N3U4 1231 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 WNT8BQ93098 351 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 FAM122AQ96E09 287 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 UBAC1Q9BSL1 405 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 C16orf70Q9BSU1 422 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 LRFN3Q9BTN0 628 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-227ENST00000485102 EPHX3Q9H6B9 360 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
HDAC6-227ENST00000485102 BAZ2BQ9UIF8 2168 aaKnown RBP15.14■□□□□ 0.01
HDAC6-227ENST00000485102 SIP14410 1827 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
HDAC6-227ENST00000485102 GPR37L1O60883 481 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-227ENST00000485102 ZNF286BP0CG31 522 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 PGM5Q15124 567 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 PLEKHG4Q58EX7 1191 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
HDAC6-227ENST00000485102 TMCO2Q7Z6W1 182 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-227ENST00000485102 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-227ENST00000485102 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 SPATA33Q96N06 139 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 RIOX1Q9H6W3 641 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 PCDHA1Q9Y5I3 950 aa15.13■□□□□ 0.01
HDAC6-227ENST00000485102 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-227ENST00000485102 RSPH10B2B2RC85 870 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 CAND2O75155 1236 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 GGPS1O95749 300 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 RSPH10BP0C881 870 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 ZNF200P98182 395 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-227ENST00000485102 SP2Q02086 613 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 HIC1Q14526 733 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 DBF4BQ8NFT6 615 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 SAMD11Q96NU1 681 aa15.12■□□□□ 0.01
HDAC6-227ENST00000485102 UBE2ZQ9H832 354 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-227ENST00000485102 MYO7AQ13402 2215 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 PI4K2BG5E9Z4 385 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 H3BRB1 525 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 STAM2O75886 525 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-227ENST00000485102 UBA1P22314 1058 aaKnown RBP15.11■□□□□ 0.01
HDAC6-227ENST00000485102 ICAM3P32942 547 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 LEXMQ3ZCV2 418 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 TMEM31Q5JXX7 168 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 TUT1Q9H6E5 874 aaKnown RBP15.11■□□□□ 0.01
HDAC6-227ENST00000485102 MUC6Q6W4X9 2439 aa15.11■□□□□ 0.01
HDAC6-227ENST00000485102 GCOM1H8Y6P7 765 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-227ENST00000485102 AMHP03971 560 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 POLR2MP0CAP2 368 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 CCND2P30279 289 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-227ENST00000485102 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC6-227ENST00000485102 IL31RAQ8NI17 732 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 TOP1MTQ969P6 601 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 USP26Q9BXU7 913 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 MLXIPQ9HAP2 919 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 FRMPD4Q14CM0 1322 aa15.1■□□□□ 0.01
HDAC6-227ENST00000485102 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 IGHDP01880 384 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 HOXA13P31271 388 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-227ENST00000485102 THPOP40225 353 aa15.09■□□□□ 0.01
HDAC6-227ENST00000485102 GRM4Q14833 912 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms