RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 UBIAD1Q9Y5Z9 338 aa20.34■□□□□ 0.85
SREBF1-213ENST00000485080 EVI5O60447 810 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 HOXD8P13378 290 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-213ENST00000485080 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
SREBF1-213ENST00000485080 BEX3Q00994 111 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 ST3GAL1Q11201 340 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 SEMA3FQ13275 785 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 MYSM1Q5VVJ2 828 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 NLRX1Q86UT6 975 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 COPS5Q92905 334 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-213ENST00000485080 PCDHA4Q9UN74 947 aa20.33■□□□□ 0.85
SREBF1-213ENST00000485080 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
SREBF1-213ENST00000485080 CYP3A4P08684 503 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 ITGB5P18084 799 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 UBA1P22314 1058 aaKnown RBP20.32■□□□□ 0.84
SREBF1-213ENST00000485080 NLRP5P59047 1200 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 SP2Q02086 613 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 NPY5RQ15761 445 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 CELF3Q5SZQ8 465 aaKnown RBP20.32■□□□□ 0.84
SREBF1-213ENST00000485080 SLC43A3Q8NBI5 491 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 PPTC7Q8NI37 304 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 JADE2Q9NQC1 790 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 STARD7Q9NQZ5 370 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 TMEM260Q9NX78 707 aa20.32■□□□□ 0.84
SREBF1-213ENST00000485080 M0R2N6 131 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 XBP1P17861 261 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 MCM2P49736 904 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 CDK7P50613 346 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 ARHGAP4P98171 946 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 PURAQ00577 322 aaKnown RBP20.31■□□□□ 0.84
SREBF1-213ENST00000485080 NEDD9Q14511 834 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 JAKMIP3Q5VZ66 844 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 NIPA1Q7RTP0 329 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 DHX37Q8IY37 1157 aaKnown RBP20.31■□□□□ 0.84
SREBF1-213ENST00000485080 GIMAP8Q8ND71 665 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-213ENST00000485080 TOX2Q96NM4 488 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 RTEL1Q9NZ71 1219 aa20.31■□□□□ 0.84
SREBF1-213ENST00000485080 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 MEIS1O00470 390 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 ATN1P54259 1190 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-213ENST00000485080 RTP1P59025 263 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 CEP55Q53EZ4 464 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 PRPF38BQ5VTL8 546 aaKnown RBP20.3■□□□□ 0.84
SREBF1-213ENST00000485080 METTL7BQ6UX53 244 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 CXCL17Q6UXB2 119 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 ANKRD33Q7Z3H0 272 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 MXRA8Q9BRK3 442 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
SREBF1-213ENST00000485080 A0A0U1RQG5 324 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-213ENST00000485080 ARVCFO00192 962 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 PPFIA4O75335 1185 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 GGPS1O95749 300 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 MMP3P08254 477 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 CIITAP33076 1130 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 ZFP91Q96JP5 570 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-213ENST00000485080 PGBD1Q96JS3 809 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 MTG1Q9BT17 334 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-213ENST00000485080 MYH7BA7E2Y1 1941 aa20.29■□□□□ 0.84
SREBF1-213ENST00000485080 MROH7Q68CQ1 1323 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 KCNA2P16389 499 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 USP11P51784 963 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 MTMR1Q13613 665 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 DGKDQ16760 1214 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 ALG1Q9BT22 464 aa20.28■□□□□ 0.84
SREBF1-213ENST00000485080 GRIN2DO15399 1336 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 JAK2O60674 1132 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 HMGN5P82970 282 aaKnown RBP20.27■□□□□ 0.84
SREBF1-213ENST00000485080 HSDL1Q3SXM5 330 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 TRIM60Q495X7 471 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 RASGRP4Q8TDF6 673 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 SPATA33Q96N06 139 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 MLXIPQ9HAP2 919 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 KCNH7Q9NS40 1196 aa20.27■□□□□ 0.84
SREBF1-213ENST00000485080 H0YGN5 161 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 EDIL3O43854 480 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 ATP9AO75110 1047 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 TLE2Q04725 743 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 ITGA7Q13683 1181 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 C7orf61Q8IZ16 206 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 CYP2W1Q8TAV3 490 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 NFASCO94856 1347 aa20.26■□□□□ 0.83
SREBF1-213ENST00000485080 IGLV3-22A0A075B6J6 115 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 FAM86B1E9PN63 330 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 MYL3P08590 195 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 FAM86B2P0C5J1 330 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 NFRKBQ6P4R8 1299 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 KRT25Q7Z3Z0 450 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms