RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ANKS1AQ92625 1134 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 TAAR1Q96RJ0 339 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 UBA5Q9GZZ9 404 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 INSL6Q9Y581 213 aa17.89■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DCXO43602 365 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 EFCAB14O75071 495 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ZNF286BP0CG31 522 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 NT5C2P49902 561 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PTK7Q13308 1070 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 CDC37Q16543 378 aaPredicted RBP17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DGKDQ16760 1214 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 IMMTQ16891 758 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 MYOCDQ8IZQ8 938 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 COL20A1Q9P218 1284 aa17.88■□□□□ 0.45
HLA-DQB1-208ENST00000484729 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 LGR5O75473 907 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 HIC1Q14526 733 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 MFSD10Q14728 455 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 EPC2Q52LR7 807 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ZSCAN10Q96SZ4 725 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DHX16O60231 1041 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 KIAA0753Q2KHM9 967 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PUS10Q3MIT2 529 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 TCEAL5Q5H9L2 206 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DBF4BQ8NFT6 615 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 SYTL5Q8TDW5 730 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
HLA-DQB1-208ENST00000484729 TRIOO75962 3097 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 HAS3O00219 553 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 SORBS3O60504 671 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ABCB11O95342 1321 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 AMHP03971 560 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 HTRA4P83105 476 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ZP2Q05996 745 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 STXBP2Q15833 593 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PTPROQ16827 1216 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ASPRV1Q53RT3 343 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 NSUN6Q8TEA1 469 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 UBAC1Q9BSL1 405 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 KRT23Q9C075 422 aa17.85■□□□□ 0.45
HLA-DQB1-208ENST00000484729 F2P00734 622 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 EIF2AK2P19525 551 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 THPOP40225 353 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 GPM6BQ13491 265 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 HFE2Q6ZVN8 426 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 PABPC5Q96DU9 382 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 RMDN3Q96TC7 470 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 KATNAL1Q9BW62 490 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
HLA-DQB1-208ENST00000484729 H3BNC9 293 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 UPP2O95045 317 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TIGD5Q53EQ6 642 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 DHX37Q8IY37 1157 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 YME1L1Q96TA2 773 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 OSBPL7Q9BZF2 842 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 IL25Q9H293 177 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MRVI1Q9Y6F6 885 aa17.83■□□□□ 0.44
HLA-DQB1-208ENST00000484729 KIAA1217Q5T5P2 1943 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 C5orf42Q9H799 3197 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 C19orf67A6NJJ6 358 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 RSPH10B2B2RC85 870 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 RSPH10BP0C881 870 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 IRS1P35568 1242 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 LAMC2Q13753 1193 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CLUL1Q15846 466 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 QRICH1Q2TAL8 776 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 IFIT1BQ5T764 474 aaKnown RBP17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TMEM192Q8IY95 271 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PPTC7Q8NI37 304 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 EMID1Q96A84 441 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 VAT1LQ9HCJ6 419 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 CLDND1Q9NY35 253 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MICAL3Q7RTP6 2002 aa17.82■□□□□ 0.44
HLA-DQB1-208ENST00000484729 EMSYQ7Z589 1322 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 EIF3JO75822 258 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PLEKHG4Q58EX7 1191 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SERINC5Q86VE9 423 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 MCF2L2Q86YR7 1114 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 ADHFE1Q8IWW8 467 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 SAMD11Q96NU1 681 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 PHOX2BQ99453 314 aa17.81■□□□□ 0.44
HLA-DQB1-208ENST00000484729 NSUN3Q9H649 340 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms