RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CELF3Q5SZQ8 465 aaKnown RBP14.83□□□□□ -0.04
HDAC1-209ENST00000484305 PCNX4Q63HM2 1172 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 NFRKBQ6P4R8 1299 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 PPTC7Q8NI37 304 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 KAT2BQ92831 832 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 NOC4LQ9BVI4 516 aaKnown RBP14.83□□□□□ -0.04
HDAC1-209ENST00000484305 HIPK3Q9H422 1215 aa14.83□□□□□ -0.04
HDAC1-209ENST00000484305 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 CYP2C9P11712 490 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 ICAM3P32942 547 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 NAPAP54920 295 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 SEMA3FQ13275 785 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 TOB2Q14106 344 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-209ENST00000484305 HSDL1Q3SXM5 330 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 GNPTABQ3T906 1256 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 C16orf59Q7L2K0 433 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 TMEM199Q8N511 208 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 SPATA33Q96N06 139 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 RIC8AQ9NPQ8 531 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 NID2Q14112 1375 aa14.82□□□□□ -0.04
HDAC1-209ENST00000484305 TRIP12Q14669 1992 aaPredicted RBP14.82□□□□□ -0.04
HDAC1-209ENST00000484305 CCDC196A0A1B0GTZ2 297 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 STXBP3O00186 592 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 ZNF286BP0CG31 522 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 HOXD8P13378 290 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-209ENST00000484305 PDIA3P30101 505 aaKnown RBP14.81□□□□□ -0.04
HDAC1-209ENST00000484305 EVCP57679 992 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 XRRA1Q6P2D8 792 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 UPF3BQ9BZI7 483 aaKnown RBP14.81□□□□□ -0.04
HDAC1-209ENST00000484305 TM6SF1Q9BZW5 370 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 MLXIPQ9HAP2 919 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
HDAC1-209ENST00000484305 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 SMCO2A6NFE2 343 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 SPDYE3A6NKU9 549 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 hCG_1984214I3L0E3 225 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 FIBPO43427 364 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PPFIA4O75335 1185 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 SUPT20HL2P0C7V6 817 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 ACRP10323 421 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 CCL23P55773 120 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 CCT2P78371 535 aaKnown RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PTPN11Q06124 597 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.044e-7■■■■■ 27.5
HDAC1-209ENST00000484305 NTRK3Q16288 839 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PFKFB3Q16875 520 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 CYFIP1Q7L576 1253 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 ZNF713Q8N859 430 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 RNPC3Q96LT9 517 aaKnown RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.8□□□□□ -0.049e-6■■■■■ 27.7
HDAC1-209ENST00000484305 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 WNT8AQ9H1J5 351 aa14.8□□□□□ -0.04
HDAC1-209ENST00000484305 LAMA2P24043 3122 aaKnown RBP14.8□□□□□ -0.04
HDAC1-209ENST00000484305 HAS3O00219 553 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 F2P00734 622 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 SCG2P13521 617 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 ITGB5P18084 799 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 PSEN2P49810 448 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 ADCY7P51828 1080 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 NEDD9Q14511 834 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 MFSD10Q14728 455 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 PKN1Q16512 942 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 TMEM240Q5SV17 173 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 ZNF365Q70YC5 407 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 Q7L0L9 218 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 NLRX1Q86UT6 975 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 PHKBQ93100 1093 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 PGBD1Q96JS3 809 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 C16orf70Q9BSU1 422 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 ALG1Q9BT22 464 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
HDAC1-209ENST00000484305 IL23AQ9NPF7 189 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 TMEM260Q9NX78 707 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 TELO2Q9Y4R8 837 aa14.79□□□□□ -0.04
HDAC1-209ENST00000484305 PRPF3O43395 683 aaKnown RBP14.78□□□□□ -0.04
HDAC1-209ENST00000484305 ATP9AO75110 1047 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 PTGISQ16647 500 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 KIAA0753Q2KHM9 967 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 GDF6Q6KF10 455 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-209ENST00000484305 METTL7BQ6UX53 244 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 GPRASP2Q96D09 838 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 SCLYQ96I15 445 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 SENP7Q9BQF6 1050 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 KATNAL1Q9BW62 490 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 GTF2IRD1Q9UHL9 959 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 UBIAD1Q9Y5Z9 338 aa14.78□□□□□ -0.04
HDAC1-209ENST00000484305 NOP56O00567 594 aaKnown RBP14.77□□□□□ -0.05
HDAC1-209ENST00000484305 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
HDAC1-209ENST00000484305 LGALS2P05162 132 aa14.77□□□□□ -0.05
HDAC1-209ENST00000484305 CLK2P49760 499 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms