RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 LOC285556D6RIA3 1793 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 LOC102724159A0A0B4J2E5 919 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TMEM232C9JQI7 657 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 KBTBD13C9JR72 458 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 ZNF213O14771 459 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 PEX10O60683 326 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 COBLO75128 1261 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 PPFIA3O75145 1194 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 RARBP10826 455 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TOP1P11387 765 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 COL6A1P12109 1028 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 AKR1A1P14550 325 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 CCND3P30281 292 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 CYP2C19P33261 490 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 NOVP48745 357 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 PWP2Q15269 919 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 FAM47AQ5JRC9 791 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 WDR44Q5JSH3 913 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TBCELQ5QJ74 424 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 AKNAD1Q5T1N1 836 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 RNF180Q86T96 592 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 DGKHQ86XP1 1220 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 ANKRD35Q8N283 1001 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 REPS2Q8NFH8 660 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 EXOC6Q8TAG9 804 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 NPLOC4Q8TAT6 608 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 GAS2L1Q99501 681 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 MPHOSPH6Q99547 160 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TINF2Q9BSI4 451 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 NIFKQ9BYG3 293 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 CNNM2Q9H8M5 875 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TOMM22Q9NS69 142 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 FBXO28Q9NVF7 368 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 SCHIP1Q9P0W5 487 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 PRKAG2Q9UGJ0 569 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 ISY1Q9ULR0 285 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 RANBP2P49792 3224 aaKnown RBP7.24□□□□□ -1.25
PTCD3-215ENST00000484203 PFASO15067 1338 aa7.24□□□□□ -1.25
PTCD3-215ENST00000484203 TRIOBPQ9H2D6 2365 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 A0A0D9SFI3 127 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 ASB14A6NK59 587 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 B4DLN1 442 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 SMIM22K7EJ46 135 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 ATG7O95352 703 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 IGHDP01880 384 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 MCCP23508 829 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 BMP8BP34820 402 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 PLA2G4AP47712 749 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 MRPL12P52815 198 aaKnown RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 NMIQ13287 307 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 IMMTQ16891 758 aaKnown RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 GPATCH4Q5T3I0 446 aaKnown RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 MAMDC4Q6UXC1 1216 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 CPXCR1Q8N123 301 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 LRRC47Q8N1G4 583 aaKnown RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 FAM227BQ96M60 508 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 SEZ6LQ9BYH1 1024 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 KRT23Q9C075 422 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 ABHD16BQ9H3Z7 469 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 ACAD9Q9H845 621 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 FLRT1Q9NZU1 646 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 FAM184BQ9ULE4 1060 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 DYRK1BQ9Y463 629 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 SUPT16HQ9Y5B9 1047 aaKnown RBP7.23□□□□□ -1.25
PTCD3-215ENST00000484203 USP3Q9Y6I4 520 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 RAD50Q92878 1312 aa7.23□□□□□ -1.25
PTCD3-215ENST00000484203 DNAJC25-GNG10A0A024R161 153 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 FOXP2O15409 715 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 LGR5O75473 907 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 GMPRP36959 345 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 EPHA4P54764 986 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 TRDNQ13061 729 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 TRAF1Q13077 416 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 ELOAQ14241 798 aaKnown RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 CCDC96Q2M329 555 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 CWC27Q6UX04 472 aaKnown RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 BTNL9Q6UXG8 535 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 CCDC129Q6ZRS4 1044 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 DIS3LQ8TF46 1054 aaKnown RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 NUP133Q8WUM0 1156 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 NUP88Q99567 741 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 LBHD1Q9BQE6 289 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 SENP6Q9GZR1 1112 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 TSPAN10Q9H1Z9 355 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 RAVER2Q9HCJ3 691 aaKnown RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 XPNPEP3Q9NQH7 507 aa7.22□□□□□ -1.25
PTCD3-215ENST00000484203 ADD3Q9UEY8 706 aaKnown RBP7.22□□□□□ -1.25
PTCD3-215ENST00000484203 DUSP11O75319 330 aaKnown RBP7.21□□□□□ -1.26
PTCD3-215ENST00000484203 ICAM1P05362 532 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 PGK2P07205 417 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 FOXK2Q01167 660 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms