RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 RTEL1-TNFRSF6BF6WH68 1400 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 LCA5LO95447 670 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 SMTNP53814 917 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 DSG1Q02413 1049 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TMTC4Q5T4D3 741 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TTBK2Q6IQ55 1244 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 POMGNT1Q8WZA1 660 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TARSL2A2RTX5 802 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 VHLP40337 213 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 HDDC2Q7Z4H3 204 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 ST13P5Q8NFI4 369 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 CCT7Q99832 543 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 ATP6V1B1P15313 513 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 AGGF1Q8N302 714 aaeCLIP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TAB3Q8N5C8 712 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TUBA8Q9NY65 449 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 APOBEC2Q9Y235 224 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 SSH2Q76I76 1423 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 DDHD2O94830 711 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 AOX1Q06278 1338 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 CFAP69A5D8W1 941 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 COBLO75128 1261 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ACTN1P12814 892 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 DIS3L2Q8IYB7 885 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 NMD3Q96D46 503 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 CYFIP2Q96F07 1278 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MTRQ99707 1265 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 C19orf44Q9H6X5 657 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 PA2G4Q9UQ80 394 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TTLL3Q9Y4R7 772 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MYBL1P10243 752 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 BFSP1Q12934 665 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 KRT31Q15323 416 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 KBTBD12Q3ZCT8 623 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TEDDM1Q5T9Z0 273 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 LRRC8BQ6P9F7 803 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TTLL7Q6ZT98 887 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 GRAMD1AQ96CP6 724 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 FIS1Q9Y3D6 152 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 PDE1BQ01064 536 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 FSCBQ5H9T9 825 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TTI1O43156 1089 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 PDHBP11177 359 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 FBXL13Q8NEE6 735 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MPP4Q96JB8 637 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ARL2BPQ9Y2Y0 163 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ZBTB7BO15156 539 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ERFP50548 548 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ARHGDIAP52565 204 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 KRT81Q14533 505 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MRPL40Q9NQ50 206 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 ACADSP16219 412 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 KLC3Q6P597 504 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 TRIM63Q969Q1 353 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 CLIC4Q9Y696 253 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 DAPK1P53355 1430 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 MYO10Q9HD67 2058 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 XPOTO43592 962 aaKnown RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 BAG3O95817 575 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 IRAK1P51617 712 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
COL12A1-207ENST00000483888 C6orf203Q9P0P8 240 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-207ENST00000483888 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 SARM1Q6SZW1 724 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 TTC17Q96AE7 1141 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 PKD2L2Q9NZM6 624 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 ARHGEF25Q86VW2 580 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 TUBGCP2Q9BSJ2 902 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 RPRD2Q5VT52 1461 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 HIC1Q14526 733 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 CNBD2Q96M20 576 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 P4HA2O15460 535 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 VSNL1P62760 191 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 UBE3AQ05086 875 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 SRRM1Q8IYB3 904 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 ADNPQ9H2P0 1102 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 DNAJC17Q9NVM6 304 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 HPCAL4Q9UM19 191 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 TAF4O00268 1085 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms