RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ARHGAP1Q07960 439 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 NEDD9Q14511 834 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 SNX17Q15036 470 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 LY6KQ17RY6 165 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 BLIDQ8IZY5 108 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 ALG1Q9BT22 464 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 STARD7Q9NQZ5 370 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 TMEM260Q9NX78 707 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 NR2E3Q9Y5X4 410 aa17.82■□□□□ 0.44
RPP40-206ENST00000483546 FDPSP14324 419 aaKnown RBP17.81■□□□□ 0.44
RPP40-206ENST00000483546 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 ST3GAL1Q11201 340 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 SLC39A5Q6ZMH5 540 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 NIPA1Q7RTP0 329 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 CCDC83Q8IWF9 413 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 DHX37Q8IY37 1157 aaKnown RBP17.81■□□□□ 0.44
RPP40-206ENST00000483546 CRYGNQ8WXF5 182 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 DPF3Q92784 378 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 MXRA8Q9BRK3 442 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 JADE2Q9NQC1 790 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 RTEL1Q9NZ71 1219 aa17.81■□□□□ 0.44
RPP40-206ENST00000483546 MROH7Q68CQ1 1323 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 EVI5O60447 810 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 ITGB5P18084 799 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 UBA1P22314 1058 aaKnown RBP17.8■□□□□ 0.44
RPP40-206ENST00000483546 BEX3Q00994 111 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 MTMR1Q13613 665 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 CEP55Q53EZ4 464 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 CELF3Q5SZQ8 465 aaKnown RBP17.8■□□□□ 0.44
RPP40-206ENST00000483546 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 PPTC7Q8NI37 304 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 COPS5Q92905 334 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 FERMT2Q96AC1 680 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 SCN10AQ9Y5Y9 1956 aa17.8■□□□□ 0.44
RPP40-206ENST00000483546 TNRC18O15417 2968 aaPredicted RBP17.79■□□□□ 0.44
RPP40-206ENST00000483546 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
RPP40-206ENST00000483546 M0R2N6 131 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 GGPS1O95749 300 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 ZNF76P36508 570 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 USP11P51784 963 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 SETQ01105 290 aaPredicted RBP17.79■□□□□ 0.44
RPP40-206ENST00000483546 TRIM29Q14134 588 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 NPY5RQ15761 445 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 KRT25Q7Z3Z0 450 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 PGBD1Q96JS3 809 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 MTG1Q9BT17 334 aaPredicted RBP17.79■□□□□ 0.44
RPP40-206ENST00000483546 MLXIPQ9HAP2 919 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
RPP40-206ENST00000483546 DOCK5Q9H7D0 1870 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 MEIS1O00470 390 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 JAK2O60674 1132 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 PPFIA4O75335 1185 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 MMP3P08254 477 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 HOXD8P13378 290 aaPredicted RBP17.78■□□□□ 0.44
RPP40-206ENST00000483546 CIITAP33076 1130 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 IRX5P78411 483 aaPredicted RBP17.78■□□□□ 0.44
RPP40-206ENST00000483546 PURAQ00577 322 aaKnown RBP17.78■□□□□ 0.44
RPP40-206ENST00000483546 SEMA3FQ13275 785 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 DGKDQ16760 1214 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 LRRC26Q2I0M4 334 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 AFG1LQ8WV93 481 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
RPP40-206ENST00000483546 ZFP91Q96JP5 570 aaPredicted RBP17.78■□□□□ 0.44
RPP40-206ENST00000483546 PTGS1P23219 599 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
RPP40-206ENST00000483546 RTP1P59025 263 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 SP2Q02086 613 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 RASGRP4Q8TDF6 673 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 VTI1AQ96AJ9 217 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 SPATA33Q96N06 139 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 TOX2Q96NM4 488 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
RPP40-206ENST00000483546 NFASCO94856 1347 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 ARVCFO00192 962 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
RPP40-206ENST00000483546 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 MYL3P08590 195 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 KCNA2P16389 499 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 KRT2P35908 639 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPP40-206ENST00000483546 MOXD1Q6UVY6 613 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 ANKRD33Q7Z3H0 272 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 SLC43A3Q8NBI5 491 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 KATNAL1Q9BW62 490 aa17.76■□□□□ 0.43
RPP40-206ENST00000483546 IGLV3-22A0A075B6J6 115 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
RPP40-206ENST00000483546 MMP1P03956 469 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 CDK7P50613 346 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
RPP40-206ENST00000483546 SAFBQ15424 915 aaKnown RBP eCLIP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms