RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MYCNP04198 464 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-224ENST00000483359 USP11P51784 963 aa20.27■□□□□ 0.84
CPNE1-224ENST00000483359 PLA2G4DQ86XP0 818 aa20.27■□□□□ 0.84
CPNE1-224ENST00000483359 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
CPNE1-224ENST00000483359 IGLV3-22A0A075B6J6 115 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 ARP10275 920 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
CPNE1-224ENST00000483359 NBR1Q14596 966 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 GPRASP2Q96D09 838 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 KCNH7Q9NS40 1196 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 FRMPD3Q5JV73 1810 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 RBM47A0AV96 593 aaKnown RBP20.26■□□□□ 0.83
CPNE1-224ENST00000483359 RARBP10826 455 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 SP2Q02086 613 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 IQSEC1Q6DN90 963 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 ABHD8Q96I13 439 aa20.26■□□□□ 0.83
CPNE1-224ENST00000483359 DDX41Q9UJV9 622 aaKnown RBP20.26■□□□□ 0.83
CPNE1-224ENST00000483359 DOCK5Q9H7D0 1870 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 MEIS1O00470 390 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 SLC37A4O43826 429 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 CIITAP33076 1130 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 IRX5P78411 483 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-224ENST00000483359 DUSP28Q4G0W2 176 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 CCDC62Q6P9F0 684 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 TLK2Q86UE8 772 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 LENG9Q96B70 501 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 BCAS3Q9H6U6 928 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 DDX25Q9UHL0 483 aaKnown RBP20.25■□□□□ 0.83
CPNE1-224ENST00000483359 SPATA31C2B4DYI2 1134 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 ATP9AO75110 1047 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 PGK1P00558 417 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 GJA10Q969M2 543 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 XPNPEP3Q9NQH7 507 aa20.25■□□□□ 0.83
CPNE1-224ENST00000483359 NOL7Q9UMY1 257 aaKnown RBP20.25■□□□□ 0.83
CPNE1-224ENST00000483359 GNEQ9Y223 722 aaKnown RBP20.25■□□□□ 0.83
CPNE1-224ENST00000483359 SYNRGQ9UMZ2 1314 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 ICAM3P32942 547 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
CPNE1-224ENST00000483359 SP4Q02446 784 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 LHX8Q68G74 356 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 CDHR1Q96JP9 859 aa20.24■□□□□ 0.83
CPNE1-224ENST00000483359 DYNC1LI2O43237 492 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 MSCO60682 206 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 GGPS1O95749 300 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 MCM7P33993 719 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 RESTQ13127 1097 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 OR6J1Q8NGC5 347 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 TMEM106CQ9BVX2 250 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 DDX39AO00148 427 aaKnown RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 DUSP11O75319 330 aaKnown RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 C6orf222P0C671 652 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 KCNA2P16389 499 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 TTC38Q5R3I4 469 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 KCNV1Q6PIU1 500 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 CYFIP1Q7L576 1253 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 ZNF577Q9BSK1 485 aa20.23■□□□□ 0.83
CPNE1-224ENST00000483359 AGO4Q9HCK5 861 aaKnown RBP20.23■□□□□ 0.83
CPNE1-224ENST00000483359 MYADML2A6NDP7 307 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 GJB1P08034 283 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 TGFB3P10600 412 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 ITGB3BPQ13352 177 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-224ENST00000483359 ZNF174Q15697 407 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 FOXD4L6Q3SYB3 417 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-224ENST00000483359 Q4G0T1 1027 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 MOXD1Q6UVY6 613 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 FOXD4L3Q6VB84 417 aaPredicted RBP20.22■□□□□ 0.83
CPNE1-224ENST00000483359 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 BRAPQ7Z569 592 aa20.22■□□□□ 0.83
CPNE1-224ENST00000483359 DHX37Q8IY37 1157 aaKnown RBP20.22■□□□□ 0.83
CPNE1-224ENST00000483359 CYP3A7-CYP3A51PA0A087WV96 503 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 IPO5O00410 1097 aaKnown RBP20.21■□□□□ 0.83
CPNE1-224ENST00000483359 MSH4O15457 936 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 GH1P01241 217 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 ZSCAN22P10073 491 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-224ENST00000483359 GCFC2P16383 781 aaKnown RBP20.21■□□□□ 0.83
CPNE1-224ENST00000483359 CYP3A7P24462 503 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 BEX3Q00994 111 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 MYSM1Q5VVJ2 828 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 POTEFA5A3E0 1075 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 CCDC85CA6NKD9 419 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 NKRFO15226 690 aaKnown RBP eCLIP20.21■□□□□ 0.83
CPNE1-224ENST00000483359 MAFGO15525 162 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 NEMFO60524 1076 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 ARHGAP1Q07960 439 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 MBOAT7Q96N66 472 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 NAP1L4Q99733 375 aaKnown RBP20.21■□□□□ 0.83
CPNE1-224ENST00000483359 AP5M1Q9H0R1 490 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 TELO2Q9Y4R8 837 aa20.21■□□□□ 0.83
CPNE1-224ENST00000483359 ADAMTS4O75173 837 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 FARP2O94887 1054 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-224ENST00000483359 SGPL1O95470 568 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 F13A1P00488 732 aa20.2■□□□□ 0.82
CPNE1-224ENST00000483359 TFRCP02786 760 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms