RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 MAN1B1Q9UKM7 699 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 NFS1Q9Y697 457 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 WDR17Q8IZU2 1322 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ASAP2O43150 1006 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 PEX11AO75192 247 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SHBGP04278 402 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 KCNA3P22001 575 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 GBP1P32455 592 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 DHX9Q08211 1270 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 C8orf74Q6P047 294 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 KRT28Q7Z3Y7 464 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 USP33Q8TEY7 942 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ATP8B4Q8TF62 1192 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 LACRTQ9GZZ8 138 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 DDX25Q9UHL0 483 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 INTUQ9ULD6 942 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SNX12Q9UMY4 172 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 DUSP10Q9Y6W6 482 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ITIH6Q6UXX5 1313 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SURF6O75683 361 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 PTDSS1P48651 473 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF844Q08AG5 666 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 TRADDQ15628 312 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 SH2D4BQ5SQS7 431 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 OLFML2BQ68BL8 750 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 NME9Q86XW9 330 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 DHTKD1Q96HY7 919 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
COL4A5-205ENST00000483338 PLCB1Q9NQ66 1216 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
COL4A5-205ENST00000483338 BOLA2-SMG1P6H3BVE0 249 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 GLRX3O76003 335 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PDGFRBP09619 1106 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 GM2AP17900 193 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PSMD7P51665 324 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 COPS2P61201 443 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 GPSM2P81274 684 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 ITGA7Q13683 1181 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 IFT20Q8IY31 132 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 ELAC2Q9BQ52 826 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 FAM129AQ9BZQ8 928 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 MTFR1LQ9H019 292 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RAB17Q9H0T7 212 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 EPB41L5Q9HCM4 733 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PFDN4Q9NQP4 134 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SUCLA2Q9P2R7 463 aaPredicted RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 CTNNAL1Q9UBT7 734 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 NOVA2Q9UNW9 492 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 FRMD4BQ9Y2L6 1034 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 TIMM22Q9Y584 194 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 HEY1Q9Y5J3 304 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 COMMD3-BMI1R4GMX3 469 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PRR36Q9H6K5 1346 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 CTNND1O60716 968 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 ALDH1L1O75891 902 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 NAT2P11245 290 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SMARCA1P28370 1054 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 HSPA9P38646 679 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 ZNF131P52739 623 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 HPCAP84074 193 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 BNIP1Q12981 228 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 BIRC3Q13489 604 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 USH1GQ495M9 461 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 LUC7LQ9NQ29 371 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SIGLEC16A6NMB1 481 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 MAGEB3O15480 346 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 MMEP08473 750 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PYGMP11217 842 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 NFKBIAP25963 317 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RNASELQ05823 741 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RCN2Q14257 317 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 LRIG3Q6UXM1 1119 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 PACS1Q6VY07 963 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 LRRC34Q8IZ02 419 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 LRRC43Q8N309 656 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SSH3Q8TE77 659 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 RSPH1Q8WYR4 309 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 SNX27Q96L92 541 aa8.55□□□□□ -1.04
COL4A5-205ENST00000483338 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
COL4A5-205ENST00000483338 CARMIL3Q8ND23 1372 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 A0A0D9SFI3 127 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 TJP3O95049 919 aa8.54□□□□□ -1.04
COL4A5-205ENST00000483338 ALDH2P05091 517 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms