RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SEC23AQ15436 765 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 TRIM71Q2Q1W2 868 aaKnown RBP16.19■□□□□ 0.18
VARS-226ENST00000483275 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 TRAF7Q6Q0C0 670 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
VARS-226ENST00000483275 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 ZBED2Q9BTP6 218 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 AMNQ9BXJ7 453 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 BCAS3Q9H6U6 928 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
VARS-226ENST00000483275 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 EIF3JO75822 258 aaKnown RBP16.18■□□□□ 0.18
VARS-226ENST00000483275 GGPS1O95749 300 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
VARS-226ENST00000483275 SP2Q02086 613 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 HSDL1Q3SXM5 330 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 ZNF618Q5T7W0 954 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 CNKSR3Q6P9H4 555 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 FCHSD1Q86WN1 690 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 PIBF1Q8WXW3 757 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 PDCD2LQ9BRP1 358 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 KRT23Q9C075 422 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 NLRC5Q86WI3 1866 aa16.18■□□□□ 0.18
VARS-226ENST00000483275 HAS3O00219 553 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 CXCL10P02778 98 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
VARS-226ENST00000483275 PGM5Q15124 567 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
VARS-226ENST00000483275 SPATA33Q96N06 139 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 PIGSQ96S52 555 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
VARS-226ENST00000483275 HIP1O00291 1037 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 ZBTB5O15062 677 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 POU3F3P20264 500 aaPredicted RBP16.16■□□□□ 0.18
VARS-226ENST00000483275 PDE4AP27815 886 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 RBL2Q08999 1139 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 LAMC2Q13753 1193 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.16■□□□□ 0.189e-7■■□□□ 12.5
VARS-226ENST00000483275 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 TELO2Q9Y4R8 837 aa16.16■□□□□ 0.18
VARS-226ENST00000483275 LINC01553A4QN01 128 aa16.15■□□□□ 0.18
VARS-226ENST00000483275 GJB5O95377 273 aa16.15■□□□□ 0.18
VARS-226ENST00000483275 THPOP40225 353 aa16.15■□□□□ 0.18
VARS-226ENST00000483275 PTH1RQ03431 593 aa16.15■□□□□ 0.18
VARS-226ENST00000483275 PTK7Q13308 1070 aa16.15■□□□□ 0.18
VARS-226ENST00000483275 CELF3Q5SZQ8 465 aaKnown RBP16.15■□□□□ 0.18
VARS-226ENST00000483275 PALM3A6NDB9 673 aaPredicted RBP16.14■□□□□ 0.17
VARS-226ENST00000483275 CYTH3O43739 400 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 CTSHP09668 335 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
VARS-226ENST00000483275 GHRHRQ02643 423 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 GRM4Q14833 912 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 AAK1Q2M2I8 961 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 TRIM50Q86XT4 487 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.17
VARS-226ENST00000483275 HLA-CQ95604 372 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
VARS-226ENST00000483275 MYO7AQ13402 2215 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 IFIT3O14879 490 aaKnown RBP16.13■□□□□ 0.17
VARS-226ENST00000483275 LGR5O75473 907 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 CYP21A2P08686 494 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 SMIM10L2AP0DMW4 78 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 SMIM10L2BP0DMW5 78 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 CCND2P30279 289 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 MYOCDQ8IZQ8 938 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 RAD9AQ99638 391 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 C17orf80Q9BSJ5 609 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 MAF1Q9H063 256 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
VARS-226ENST00000483275 ABHD14A-ACY1A0A1B0GW23 586 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
VARS-226ENST00000483275 LGALS2P05162 132 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 NT5C2P49902 561 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 SP4Q02446 784 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 IKBKEQ14164 716 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 SERINC5Q86VE9 423 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 DBF4BQ8NFT6 615 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 TGS1Q96RS0 853 aaKnown RBP16.12■□□□□ 0.17
VARS-226ENST00000483275 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 COG5Q9UP83 839 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
VARS-226ENST00000483275 KAT6AQ92794 2004 aa16.12■□□□□ 0.17
VARS-226ENST00000483275 C5orf42Q9H799 3197 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 C17orf102A2RUQ5 167 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 FAM86C2PA6NEL3 165 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 RSPH10B2B2RC85 870 aa16.11■□□□□ 0.17
VARS-226ENST00000483275 TREHO43280 583 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms