RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 RHOBTB3O94955 611 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 ADCY2Q08462 1091 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 BIRC3Q13489 604 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 BARGINQ6ZT62 677 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 TBC1D1Q86TI0 1168 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 AGAP11Q8TF27 550 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 LRRC15Q8TF66 581 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 P2RX5Q93086 422 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 INPP4AQ96PE3 977 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 SH3GL3Q99963 347 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 ISCUQ9H1K1 167 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 DISC1Q9NRI5 854 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 MEGF6O75095 1541 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 ANKRD33BA6NCL7 494 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 SMNDC1O75940 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 IL2RBP14784 551 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 CCNE1P24864 410 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 PHKA1P46020 1223 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 ICA1Q05084 483 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 AGBL2Q5U5Z8 902 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 AP1ARQ63HQ0 302 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 MIS18BP1Q6P0N0 1132 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 UBLCP1Q8WVY7 318 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 FBXL5Q9UKA1 691 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 MYH7BA7E2Y1 1941 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 AP1G2O75843 785 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 EHHADHQ08426 723 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 CAPRIN2Q6IMN6 1127 aaKnown RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 CRELD2Q6UXH1 353 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 RUFY4Q6ZNE9 571 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 SAAL1Q96ER3 474 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 DHTKD1Q96HY7 919 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-205ENST00000483122 SLC12A4Q9UP95 1085 aa12.99□□□□□ -0.33
VTI1A-205ENST00000483122 TNKSO95271 1327 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 GRID2IPA4D2P6 1211 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 SEC23AQ15436 765 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 HLFQ16534 295 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 FAM43BQ6ZT52 329 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 RNF10Q8N5U6 811 aaKnown RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 USP38Q8NB14 1042 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 CHMP6Q96FZ7 201 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 RCAN1P53805 252 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 TNNC1P63316 161 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 STK4Q13043 487 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 BAP1Q92560 729 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 LRRC45Q96CN5 670 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 CALR3Q96L12 384 aaKnown RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
VTI1A-205ENST00000483122 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
VTI1A-205ENST00000483122 FCER1AP12319 257 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 ITGA6P23229 1130 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
VTI1A-205ENST00000483122 RIPK1Q13546 671 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 FAM133BQ5BKY9 247 aaKnown RBP12.97□□□□□ -0.33
VTI1A-205ENST00000483122 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 MEI1Q5TIA1 1274 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 FAM114A1Q8IWE2 563 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 TMEM59LQ9UK28 342 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 KLRC1P26715 233 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 KRT71Q3SY84 523 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 VWA3BQ502W6 1294 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 HPS3Q969F9 1004 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
VTI1A-205ENST00000483122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
VTI1A-205ENST00000483122 NOP53Q9NZM5 478 aaKnown RBP12.97□□□□□ -0.33
VTI1A-205ENST00000483122 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 MYH1P12882 1939 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms