RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 COPS5Q92905 334 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 GPRASP2Q96D09 838 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 LLPHQ9BRT6 129 aaKnown RBP18.96■□□□□ 0.63
HMGN1-214ENST00000482733 TMEM260Q9NX78 707 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
HMGN1-214ENST00000482733 TNRC18O15417 2968 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-214ENST00000482733 PTGS1P23219 599 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 NEDD9Q14511 834 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 DAGLBQ8NCG7 672 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 VTI1AQ96AJ9 217 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 ZFP91Q96JP5 570 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-214ENST00000482733 SENP7Q9BQF6 1050 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 SEZ6LQ9BYH1 1024 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 JADE2Q9NQC1 790 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 UBIAD1Q9Y5Z9 338 aa18.95■□□□□ 0.62
HMGN1-214ENST00000482733 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
HMGN1-214ENST00000482733 CELF3Q5SZQ8 465 aaKnown RBP18.94■□□□□ 0.62
HMGN1-214ENST00000482733 GIMAP8Q8ND71 665 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-214ENST00000482733 PGBD1Q96JS3 809 aa18.94■□□□□ 0.62
HMGN1-214ENST00000482733 AIFM3Q96NN9 605 aa18.94■□□□□ 0.62
HMGN1-214ENST00000482733 ALG1Q9BT22 464 aa18.94■□□□□ 0.62
HMGN1-214ENST00000482733 A0A0U1RQG5 324 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-214ENST00000482733 GGPS1O95749 300 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 CYP3A4P08684 503 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 FDPSP14324 419 aaKnown RBP18.93■□□□□ 0.62
HMGN1-214ENST00000482733 ITGB5P18084 799 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 ZNF76P36508 570 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 RTP1P59025 263 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 ARHGAP4P98171 946 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MTMR1Q13613 665 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 CEP55Q53EZ4 464 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MYSM1Q5VVJ2 828 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 CXCL17Q6UXB2 119 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 BLIDQ8IZY5 108 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 PPTC7Q8NI37 304 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 AFG1LQ8WV93 481 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MXRA8Q9BRK3 442 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MTG1Q9BT17 334 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MLXIPQ9HAP2 919 aa18.93■□□□□ 0.62
HMGN1-214ENST00000482733 MMP3P08254 477 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 MYL3P08590 195 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
HMGN1-214ENST00000482733 PURAQ00577 322 aaKnown RBP18.92■□□□□ 0.62
HMGN1-214ENST00000482733 SP2Q02086 613 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 SEMA3FQ13275 785 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 DGKDQ16760 1214 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 METTL7BQ6UX53 244 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 NIPA1Q7RTP0 329 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 C7orf61Q8IZ16 206 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 SPATA33Q96N06 139 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 ATP11BQ9Y2G3 1177 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 MROH7Q68CQ1 1323 aa18.92■□□□□ 0.62
HMGN1-214ENST00000482733 ARVCFO00192 962 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 JAK2O60674 1132 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 TRIM29Q14134 588 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 TRIM60Q495X7 471 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
HMGN1-214ENST00000482733 RASGRP4Q8TDF6 673 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 CRYGNQ8WXF5 182 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 TOX2Q96NM4 488 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 KCNJ14Q9UNX9 436 aa18.91■□□□□ 0.62
HMGN1-214ENST00000482733 M0R2N6 131 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 MEIS1O00470 390 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 ADAMTS3O15072 1205 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 PPFIA4O75335 1185 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 ITGA7Q13683 1181 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 NPY5RQ15761 445 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 ANKRD33Q7Z3H0 272 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 KRT25Q7Z3Z0 450 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 KCNH7Q9NS40 1196 aa18.9■□□□□ 0.62
HMGN1-214ENST00000482733 NOP56O00567 594 aaKnown RBP18.89■□□□□ 0.61
HMGN1-214ENST00000482733 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-214ENST00000482733 KCNA2P16389 499 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 CIITAP33076 1130 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 CDK7P50613 346 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 USP11P51784 963 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 SETQ01105 290 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-214ENST00000482733 CYFIP1Q7L576 1253 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 SLC43A3Q8NBI5 491 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 PRKAG2Q9UGJ0 569 aa18.89■□□□□ 0.61
HMGN1-214ENST00000482733 KIAA1217Q5T5P2 1943 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 DCDC2CA8MYV0 355 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 H0YGN5 161 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 PQBP1O60828 265 aaKnown RBP18.88■□□□□ 0.61
HMGN1-214ENST00000482733 TLE2Q04725 743 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 NONOQ15233 471 aaKnown RBP eCLIP18.88■□□□□ 0.61
HMGN1-214ENST00000482733 HSDL1Q3SXM5 330 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 CYP2W1Q8TAV3 490 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 TMX3Q96JJ7 454 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 KATNAL1Q9BW62 490 aa18.88■□□□□ 0.61
HMGN1-214ENST00000482733 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 FAM86B1E9PN63 330 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
HMGN1-214ENST00000482733 SORBS3O60504 671 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 DTNBO60941 627 aa18.87■□□□□ 0.61
HMGN1-214ENST00000482733 ATP9AO75110 1047 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms