RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 SPATA31C2B4DYI2 1134 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 MAFGO15525 162 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 CAND2O75155 1236 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 MYCLP12524 364 aaPredicted RBP13.98□□□□□ -0.17
FAM3D-202ENST00000482623 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 PPP2R2DQ66LE6 453 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 DEFB128Q7Z7B8 93 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 RRP36Q96EU6 259 aaKnown RBP13.98□□□□□ -0.17
FAM3D-202ENST00000482623 SPATA33Q96N06 139 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
FAM3D-202ENST00000482623 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
FAM3D-202ENST00000482623 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
FAM3D-202ENST00000482623 EYSQ5T1H1 3165 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 GGPS1O95749 300 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 GNAT1P11488 350 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 CKBP12277 381 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
FAM3D-202ENST00000482623 HOXC8P31273 242 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 ANTXR2P58335 489 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 METTL7BQ6UX53 244 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 LRRC8DQ7L1W4 858 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 HERC6Q8IVU3 1022 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 CUL5Q93034 780 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 CDHR1Q96JP9 859 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
FAM3D-202ENST00000482623 H3BRB1 525 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 FIBPO43427 364 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 KCNJ6P48051 423 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 MRPS5P82675 430 aaKnown RBP13.96□□□□□ -0.17
FAM3D-202ENST00000482623 SP2Q02086 613 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 IKBKEQ14164 716 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 ADGRE1Q14246 886 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 GPNMBQ14956 572 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 NECTIN1Q15223 517 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
FAM3D-202ENST00000482623 SERINC5Q86VE9 423 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
FAM3D-202ENST00000482623 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
FAM3D-202ENST00000482623 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.17
FAM3D-202ENST00000482623 CCDC69A6NI79 296 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 UBA1P22314 1058 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 RABGGTBP53611 331 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 AAK1Q2M2I8 961 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 TRIM71Q2Q1W2 868 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 TSGA10IPQ3SY00 556 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 NLRX1Q86UT6 975 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 SGMS1Q86VZ5 419 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 RAD9AQ99638 391 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 LSG1Q9H089 658 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 SENP2Q9HC62 589 aa13.95□□□□□ -0.18
FAM3D-202ENST00000482623 SPTBN5Q9NRC6 3674 aaKnown RBP13.95□□□□□ -0.18
FAM3D-202ENST00000482623 CHD7Q9P2D1 2997 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
FAM3D-202ENST00000482623 MEIS2O14770 477 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 PRC1O43663 620 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
FAM3D-202ENST00000482623 RPLP2P05387 115 aaKnown RBP13.94□□□□□ -0.18
FAM3D-202ENST00000482623 CA3P07451 260 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 IGFBP4P22692 258 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 SMARCC2Q8TAQ2 1214 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 ESYT1Q9BSJ8 1104 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 PSTPIP2Q9H939 334 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 THEGQ9P2T0 379 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
FAM3D-202ENST00000482623 TRANK1O15050 2925 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 NOP56O00567 594 aaKnown RBP13.93□□□□□ -0.18
FAM3D-202ENST00000482623 SLC27A2O14975 620 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 TLL1O43897 1013 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 NBNO60934 754 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 GJB5O95377 273 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 WDR5P61964 334 aaKnown RBP13.93□□□□□ -0.18
FAM3D-202ENST00000482623 TAP1Q03518 808 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 NFXL1Q6ZNB6 911 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 USP38Q8NB14 1042 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 IL31RAQ8NI17 732 aa13.93□□□□□ -0.18
FAM3D-202ENST00000482623 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
FAM3D-202ENST00000482623 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms