RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NCANO14594 1321 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 KDRP35968 1356 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 DLEC1Q9Y238 1755 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 CACNA1SQ13698 1873 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 CCDC88AQ3V6T2 1871 aa8.43□□□□□ -1.06
CLK1-212ENST00000482590 CCDC194A0A1B0GVG4 234 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 PRRG2O14669 202 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 HSP90AB1P08238 724 aaKnown RBP8.42□□□□□ -1.06
CLK1-212ENST00000482590 INHBBP09529 407 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 ZGLP1P0C6A0 271 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 TIGD5Q53EQ6 642 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 TSPYL5Q86VY4 417 aaPredicted RBP8.42□□□□□ -1.06
CLK1-212ENST00000482590 PDZD8Q8NEN9 1154 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 FAN1Q9Y2M0 1017 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 CORINQ9Y5Q5 1042 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 UBR2Q8IWV8 1755 aa8.42□□□□□ -1.06
CLK1-212ENST00000482590 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
CLK1-212ENST00000482590 UPK3BL1B0FP48 263 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 UPK3BL2E5RIL1 263 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 MAFGO15525 162 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 NUAK1O60285 661 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 PEX14O75381 377 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 SETQ01105 290 aaPredicted RBP8.41□□□□□ -1.06
CLK1-212ENST00000482590 LCE5AQ5TCM9 118 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 SOGA3Q5TF21 947 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 MEI1Q5TIA1 1274 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 CYB5D2Q8WUJ1 264 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
CLK1-212ENST00000482590 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 CHPF2Q9P2E5 772 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 TLR6Q9Y2C9 796 aa8.41□□□□□ -1.06
CLK1-212ENST00000482590 SBF1O95248 1867 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 TNRC6CQ9HCJ0 1690 aaKnown RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 PXDNLA1KZ92 1463 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 ADCY9O60503 1353 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 B8ZZF3 427 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 EIF3JO75822 258 aaKnown RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 ITPK1Q13572 414 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 PLEKHO1Q53GL0 409 aaPredicted RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 C1orf141Q5JVX7 400 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 ZNF530Q6P9A1 599 aaPredicted RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 DUSP9Q99956 384 aaKnown RBP8.4□□□□□ -1.06
CLK1-212ENST00000482590 ZSWIM4Q9H7M6 989 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 ASAP1Q9ULH1 1129 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 PCDHA11Q9Y5I1 949 aa8.4□□□□□ -1.06
CLK1-212ENST00000482590 SIPA1L3O60292 1781 aaPredicted RBP8.4□□□□□ -1.07
CLK1-212ENST00000482590 TIAM2Q8IVF5 1701 aa8.4□□□□□ -1.07
CLK1-212ENST00000482590 ADAMTS7Q9UKP4 1686 aa8.4□□□□□ -1.07
CLK1-212ENST00000482590 ERVV-2B6SEH9 535 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 LRRN2O75325 713 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 HSD3B2P26439 372 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 AMOTQ4VCS5 1084 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 SMIM5Q71RC9 77 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 MORC1Q86VD1 984 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 LILRA2Q8N149 483 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 PANK3Q9H999 370 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 METTL5Q9NRN9 209 aaKnown RBP8.39□□□□□ -1.07
CLK1-212ENST00000482590 KCNH3Q9ULD8 1083 aa8.39□□□□□ -1.07
CLK1-212ENST00000482590 WDR90Q96KV7 1748 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 MMP10P09238 476 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 PLCG1P19174 1290 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 RNF187Q5TA31 235 aaPredicted RBP8.38□□□□□ -1.07
CLK1-212ENST00000482590 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 OXR1Q8N573 874 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 FAM13CQ8NE31 585 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 IRF2BPLQ9H1B7 796 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 MRC1P22897 1456 aa8.38□□□□□ -1.07
CLK1-212ENST00000482590 NRXN2Q9P2S2 1712 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 FITM1A5D6W6 292 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
CLK1-212ENST00000482590 GNL2Q13823 731 aaKnown RBP8.37□□□□□ -1.07
CLK1-212ENST00000482590 NR0B2Q15466 257 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 SPTY2D1Q68D10 685 aaPredicted RBP8.37□□□□□ -1.07
CLK1-212ENST00000482590 JAZF1Q86VZ6 243 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 PHC3Q8NDX5 983 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 RNF141Q8WVD5 230 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 EBF1Q9UH73 591 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 KNSTRNQ9Y448 316 aa8.37□□□□□ -1.07
CLK1-212ENST00000482590 BCORQ6W2J9 1755 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 HMGB1P1B2RPK0 211 aaPredicted RBP8.36□□□□□ -1.07
CLK1-212ENST00000482590 RLBP1P12271 317 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 RFC4P35249 363 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 BUD31P41223 144 aaPredicted RBP8.36□□□□□ -1.07
CLK1-212ENST00000482590 MTHFSP49914 203 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 DLG4P78352 724 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 FANCCQ00597 558 aa8.36□□□□□ -1.07
CLK1-212ENST00000482590 RALBP1Q15311 655 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms